Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5506

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5506: 13874 - KOG2504 Monocarboxylate transporter, at 257318 to 259586 13874 mRNA_5507: 13875 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 259685 to 261151 13875

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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256,360 + 0.3
256,530 + 1.5
256,793 + 3.1
256,951 - -1.8
257,091 + 1.6
257,384 - 1.6
257,404 + 0.6
257,486 - 0.5
257,539 - 1.3
257,558 - 13874 mRNA_5506 0.11 1.9
257,656 + 13874 mRNA_5506 0.15 0.9
257,700 - 13874 mRNA_5506 0.17 1.0
258,139 - 13874 mRNA_5506 0.36 -0.8
258,280 + 13874 mRNA_5506 0.42 1.7
258,553 - 13874 mRNA_5506 0.54 -1.9
258,821 + 13874 mRNA_5506 0.66 1.1
259,182 - 13874 mRNA_5506 0.82 -0.0
259,451 + 1.0
259,895 - 13875 mRNA_5507 0.14 0.2
260,510 + 13875 mRNA_5507 0.56 -0.6