Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5498

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5498: 13866 - Hypothetical Protein, at 238766 to 240187 13866 mRNA_5499: 13867 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 240567 to 242106 13867

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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237,900 - -0.4
237,925 + 0.8
237,928 + -0.7
238,042 - -0.0
238,073 + 0.7
238,082 - -1.7
238,086 + 0.5
238,097 + 1.1
238,097 + -0.7
238,098 + 0.3
238,191 + 2.0
238,196 - -0.1
238,210 - -0.6
238,212 + 0.0
238,234 + -0.6
238,287 - 0.7
238,319 + -0.8
238,336 + -0.3
238,353 + 2.1
238,359 - -0.6
238,359 + 0.3
238,360 - -0.6
238,396 - 0.7
238,408 - 0.3
238,415 - 0.2
238,416 + 0.5
238,420 + 1.5
238,422 - 1.3
238,446 + -0.4
238,473 + -0.5
238,479 - 0.1
238,484 + -0.0
238,485 - -0.5
238,487 + 0.3
238,507 - -0.3
238,508 + 0.5
238,613 + 0.4
238,619 + -0.2
238,626 + 0.1
238,629 - 1.0
238,633 + -0.4
238,636 + 1.0
238,637 + -1.3
238,639 + 0.0
238,650 - -0.6
238,653 + 0.2
238,656 - 0.8
238,681 + -2.3
238,717 + -0.7
238,732 - -0.2
238,732 + -2.0
238,751 - 0.3
238,758 - 1.3
238,762 - 0.3
238,767 + -1.4
238,770 - 0.4
238,775 - 0.5
238,883 - 0.1
238,893 - 3.0
238,897 - 1.1
238,901 - 1.6
238,904 + 0.1
238,906 + 1.0
238,925 - 13866 mRNA_5498 0.11 0.9
238,934 + 13866 mRNA_5498 0.12 0.3
238,938 - 13866 mRNA_5498 0.12 -0.9
238,968 - 13866 mRNA_5498 0.14 0.6
238,970 - 13866 mRNA_5498 0.14 0.7
238,983 + 13866 mRNA_5498 0.15 -1.5
238,986 + 13866 mRNA_5498 0.15 -0.2
238,999 - 13866 mRNA_5498 0.16 2.9
239,004 + 13866 mRNA_5498 0.17 -0.5
239,041 - 13866 mRNA_5498 0.19 -0.5
239,043 + 13866 mRNA_5498 0.19 0.4
239,064 + 13866 mRNA_5498 0.21 0.1
239,091 + 13866 mRNA_5498 0.23 0.4
239,100 + 13866 mRNA_5498 0.23 1.3
239,111 - 13866 mRNA_5498 0.24 -0.5
239,117 - 13866 mRNA_5498 0.25 2.1
239,146 - 13866 mRNA_5498 0.27 0.3
239,167 + 13866 mRNA_5498 0.28 0.3
239,180 - 13866 mRNA_5498 0.29 -0.3
239,187 + 13866 mRNA_5498 0.30 -0.1
239,193 - 13866 mRNA_5498 0.30 -0.3
239,193 - 13866 mRNA_5498 0.30 0.8
239,196 + 13866 mRNA_5498 0.30 0.8
239,221 - 13866 mRNA_5498 0.32 -0.1
239,232 - 13866 mRNA_5498 0.33 1.3
239,237 - 13866 mRNA_5498 0.33 -2.2
239,243 - 13866 mRNA_5498 0.34 0.1
239,255 - 13866 mRNA_5498 0.34 1.2
239,272 + 13866 mRNA_5498 0.36 -0.4
239,275 + 13866 mRNA_5498 0.36 0.2
239,382 + 13866 mRNA_5498 0.43 -0.0
239,481 + 13866 mRNA_5498 0.50 -0.2
239,524 - 13866 mRNA_5498 0.53 0.7
239,671 - 13866 mRNA_5498 0.64 1.4
239,783 - 13866 mRNA_5498 0.72 -1.1
239,816 + 13866 mRNA_5498 0.74 0.0
240,374 - 0.6
240,553 + -0.4
240,773 + 13867 mRNA_5499 0.13 1.4
241,007 - 13867 mRNA_5499 0.29 0.7
241,108 + 13867 mRNA_5499 0.35 -0.6