Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5450

Experiments: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5449: 13817 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 117409 to 118509 13817 mRNA_5450: 13818 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 118824 to 121253 13818

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
117,966 + 13817 mRNA_5449 0.51 1.0
117,972 + 13817 mRNA_5449 0.51 1.3
118,025 - 13817 mRNA_5449 0.56 -2.5
118,074 - 13817 mRNA_5449 0.60 -0.3
118,099 + 13817 mRNA_5449 0.63 -1.5
118,263 + 13817 mRNA_5449 0.78 1.2
118,367 - 13817 mRNA_5449 0.87 1.0
118,375 - 13817 mRNA_5449 0.88 1.1
118,392 + 13817 mRNA_5449 0.89 0.7
118,395 - 13817 mRNA_5449 0.90 0.2
118,395 - 13817 mRNA_5449 0.90 0.2
118,395 - 13817 mRNA_5449 0.90 -0.6
118,401 + 0.1
118,488 - 0.1
118,489 + -0.4
118,831 - -1.9
118,836 + -0.2
118,936 + 0.7
119,291 + 13818 mRNA_5450 0.19 -0.1
119,583 - 13818 mRNA_5450 0.31 -0.3
119,721 - 13818 mRNA_5450 0.37 -0.1
119,901 - 13818 mRNA_5450 0.44 1.0
120,138 - 13818 mRNA_5450 0.54 0.2
120,338 - 13818 mRNA_5450 0.62 1.1
120,605 + 13818 mRNA_5450 0.73 -0.4
120,775 + 13818 mRNA_5450 0.80 -0.5
120,931 + 13818 mRNA_5450 0.87 -1.0
121,143 - 1.0
121,201 - -0.2
121,226 + 0.3
121,317 + -0.2
121,539 - 0.0
121,770 - 0.6
121,785 + -0.1
121,938 + 0.0
122,078 - 1.5
122,080 + 0.1
122,093 - 0.9
122,096 - 0.5
122,116 - 1.1