Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5335

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5334: 13702 - K14563 NOP1, FBL rRNA 2'-O-methyltransferase fibrillarin, at 479497 to 481330 13702 mRNA_5335: 13703 - HMMPfam-Domain of unknown function (DUF4202)-PF13875, at 481630 to 482657 13703 mRNA_5336: 13704 - K14777 DDX47, RRP3 ATP-dependent RNA helicase DDX47/RRP3, at 482937 to 484688 13704

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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481,414 + -0.4
481,462 + -0.5
481,532 - 0.2
481,540 + 0.3
481,564 + 0.6
481,703 + 0.0
481,703 + -0.8
481,742 - 13703 mRNA_5335 0.11 2.0
481,955 + 13703 mRNA_5335 0.32 -0.9
482,031 - 13703 mRNA_5335 0.39 0.1
482,554 + 13703 mRNA_5335 0.90 1.6
482,558 - 1.3
482,590 - -1.4
482,818 - 1.9
482,833 - 0.4
482,867 - 1.2