Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5315

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5314: 13682 - Hypothetical Protein, at 433901 to 435484 13682 mRNA_5315: 13683 - K06158 ABCF3 ATP-binding cassette, subfamily F, member 3, at 436318 to 439528 13683 mRNA_5316: 13684 - Hypothetical Protein, at 440018 to 441628 13684

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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435,449 - -0.9
435,453 + 1.0
435,456 - 2.1
435,469 + 0.6
435,755 - 0.7
435,848 - 0.3
435,903 - 1.1
436,185 - -0.5
436,683 + 13683 mRNA_5315 0.11 0.5
436,704 - 13683 mRNA_5315 0.12 0.2
436,869 + 13683 mRNA_5315 0.17 -1.2
437,102 + 13683 mRNA_5315 0.24 0.6
437,292 + 13683 mRNA_5315 0.30 1.5
437,312 + 13683 mRNA_5315 0.31 0.1
437,426 - 13683 mRNA_5315 0.35 0.6
437,426 - 13683 mRNA_5315 0.35 1.9
438,615 + 13683 mRNA_5315 0.72 0.7
438,895 - 13683 mRNA_5315 0.80 2.6
438,914 + 13683 mRNA_5315 0.81 -0.8
439,151 - 13683 mRNA_5315 0.88 -0.9
439,159 - 13683 mRNA_5315 0.88 -0.9
439,316 - 0.4
439,323 + 1.6
439,349 + 0.2
439,474 - 0.6
439,580 + -0.7
439,582 - 0.3
439,639 - 0.5
439,652 - 1.4
439,771 - -0.0
439,789 + -0.2
439,789 + -0.1
439,921 - 0.0
439,926 - 0.9
439,929 + -2.5
439,935 + 1.6
439,970 + -1.8
440,178 + -0.2
440,210 + 13684 mRNA_5316 0.12 -0.5
440,229 + 13684 mRNA_5316 0.13 1.8
440,246 + 13684 mRNA_5316 0.14 2.4
440,260 - 13684 mRNA_5316 0.15 0.6
440,525 - 13684 mRNA_5316 0.31 0.1