Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5221

Experiments: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5221: 13589 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 184059 to 187472 13589 mRNA_5222: 13590 - Hypothetical Protein, at 187738 to 188641 13590

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
183,061 + -0.7
183,064 - -0.6
183,069 + 0.6
183,070 + 0.2
183,080 + 0.1
183,093 + 0.4
183,142 + 0.9
183,163 + -0.5
183,198 - 0.3
183,218 + 0.5
183,280 - -0.5
183,316 + 0.1
183,336 - -0.2
183,345 - -0.4
183,454 - 0.4
183,477 - -0.2
183,543 + -1.3
183,786 + -1.3
183,909 + -1.3
183,914 - -1.0
183,916 - 0.2
183,924 - 0.2
183,925 + -0.3
183,939 + 2.1
183,943 + -0.8
184,069 - 1.7
184,086 + -1.6
184,313 + 0.1
184,473 - 13589 mRNA_5221 0.12 1.4
184,482 + 13589 mRNA_5221 0.12 -1.8
184,519 - 13589 mRNA_5221 0.13 0.8
184,522 - 13589 mRNA_5221 0.14 -0.1
184,524 - 13589 mRNA_5221 0.14 -0.6
184,528 + 13589 mRNA_5221 0.14 -0.3
184,933 + 13589 mRNA_5221 0.26 0.2
185,082 + 13589 mRNA_5221 0.30 -3.8
185,362 + 13589 mRNA_5221 0.38 0.6
185,385 - 13589 mRNA_5221 0.39 0.2
185,656 + 13589 mRNA_5221 0.47 0.1
185,688 - 13589 mRNA_5221 0.48 -1.2
185,692 + 13589 mRNA_5221 0.48 0.9
185,716 + 13589 mRNA_5221 0.49 2.6
185,807 + 13589 mRNA_5221 0.51 0.5
185,832 - 13589 mRNA_5221 0.52 0.8
185,853 - 13589 mRNA_5221 0.53 0.0
185,934 + 13589 mRNA_5221 0.55 -1.1
186,000 - 13589 mRNA_5221 0.57 -0.4
186,102 - 13589 mRNA_5221 0.60 0.4
186,270 - 13589 mRNA_5221 0.65 0.2
186,400 + 13589 mRNA_5221 0.69 0.2
186,403 - 13589 mRNA_5221 0.69 -0.1
186,523 + 13589 mRNA_5221 0.72 0.2
186,525 - 13589 mRNA_5221 0.72 -0.3
186,586 - 13589 mRNA_5221 0.74 0.8
186,717 - 13589 mRNA_5221 0.78 -0.8
187,013 + 13589 mRNA_5221 0.87 0.0
187,395 - -0.6
187,538 + -3.2
187,561 + 1.1
187,569 + -0.1
187,712 + 0.9
187,739 + 2.5
187,822 + -1.0
188,021 - 13590 mRNA_5222 0.31 0.5
188,189 + 13590 mRNA_5222 0.50 0.9
188,435 + 13590 mRNA_5222 0.77 1.0