Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5075

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5074: 13442 - KOG1426 FOG RCC1 domain, at 1686748 to 1688020 13442 mRNA_5075: 13443 - K00958 sat, met3 sulfate adenylyltransferase, at 1688216 to 1690274 13443 mRNA_5076: 13444 - K00588 E2.1.1.104 caffeoyl-CoA O-methyltransferase, at 1690451 to 1691745 13444

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,687,248 + 13442 mRNA_5074 0.39 0.3
1,687,408 + 13442 mRNA_5074 0.52 0.4
1,687,682 + 13442 mRNA_5074 0.73 0.4
1,687,906 - -1.9
1,688,152 + 0.1
1,688,275 - -4.3
1,688,697 - 13443 mRNA_5075 0.23 -0.3
1,688,703 + 13443 mRNA_5075 0.24 -2.3
1,688,832 - 13443 mRNA_5075 0.30 -0.2
1,688,936 - 13443 mRNA_5075 0.35 -1.9
1,689,281 - 13443 mRNA_5075 0.52 -2.3
1,689,436 - 13443 mRNA_5075 0.59 -3.4
1,689,579 - 13443 mRNA_5075 0.66 -1.4
1,689,597 - 13443 mRNA_5075 0.67 -2.5
1,689,606 + 13443 mRNA_5075 0.68 -1.4
1,689,874 + 13443 mRNA_5075 0.81 -2.6
1,690,063 + 13443 mRNA_5075 0.90 -3.2
1,690,154 - 0.3
1,690,174 - -3.3
1,690,321 - -1.5
1,690,332 + 1.3
1,690,333 - 0.6
1,690,333 - 1.4
1,690,342 + 1.5
1,690,350 + -0.6
1,690,355 + 1.7
1,690,357 + 1.5
1,690,357 + 0.9
1,690,359 + 0.5
1,690,359 - 2.4
1,690,362 + -0.3
1,690,362 - 0.8
1,690,364 + 0.4
1,690,378 + 0.2
1,690,386 - -0.8
1,690,472 + -1.8
1,690,536 + 0.2
1,691,046 + 13444 mRNA_5076 0.46 -2.1
1,691,265 - 13444 mRNA_5076 0.63 0.3