Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5055

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5054: 13422 - Hypothetical Protein, at 1640848 to 1641700 13422 mRNA_5055: 13423 - KOG1289 Amino acid transporters, at 1642260 to 1644737 13423 mRNA_5056: 13424 - K02137 ATPeF0O, ATP5O, ATP5 F-type H+-transporting ATPase subunit O, at 1645555 to 1646643 13424

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,641,530 - 13422 mRNA_5054 0.80 0.9
1,641,625 - -0.1
1,641,785 + 1.3
1,641,844 - 0.1
1,642,208 + 3.0
1,642,254 + 0.4
1,642,264 - -0.0
1,642,535 + 13423 mRNA_5055 0.11 1.2
1,642,566 - 13423 mRNA_5055 0.12 0.7
1,642,991 + 13423 mRNA_5055 0.29 1.7
1,643,700 + 13423 mRNA_5055 0.58 0.3
1,643,884 + 13423 mRNA_5055 0.66 1.0
1,644,540 + -2.6
1,644,697 + 0.3
1,644,715 + 0.2
1,644,872 + -0.5
1,644,887 + -0.2
1,644,890 - 2.6
1,644,899 - 1.0
1,644,909 + -0.5
1,644,913 + 0.2
1,644,917 + -0.8
1,644,918 + -0.8
1,644,919 - 0.1
1,644,927 + -0.4
1,644,928 + -0.0
1,644,934 + 1.0
1,644,963 - 0.9
1,645,143 - -0.4
1,645,230 - -0.5
1,645,236 - -0.4
1,645,242 - -0.6
1,645,270 + 2.0
1,645,275 + 0.5
1,645,280 - 1.5
1,645,291 + 0.2
1,645,302 - 1.8
1,645,334 + 0.2
1,645,373 + 1.3
1,645,478 - 2.5
1,645,516 - 0.4