Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5038

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5037: 13405 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 1610939 to 1612058 13405 mRNA_5038: 13406 - Hypothetical Protein, at 1613042 to 1613500 13406 mRNA_5039: 13407 - Hypothetical Protein, at 1614263 to 1614994 13407

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,612,099 + -0.1
1,612,102 + -0.8
1,612,106 + -3.2
1,612,142 - -0.4
1,612,225 - -0.5
1,612,228 + 0.3
1,612,234 + 0.9
1,612,235 + 1.3
1,612,237 + -0.2
1,612,247 - 0.1
1,612,248 - 0.5
1,612,251 + 0.8
1,612,255 + 0.3
1,612,331 + 1.9
1,612,348 + -0.5
1,612,348 + 0.7
1,612,349 - -0.4
1,612,350 + 1.5
1,612,360 + 0.9
1,612,397 - -2.5
1,612,493 + 1.0
1,612,507 + 0.3
1,612,639 - -0.1
1,612,646 - 0.2
1,612,657 - 1.0
1,612,795 - 0.4
1,612,798 + 1.6
1,612,817 - 1.3
1,612,820 - 2.7
1,612,968 - -0.1
1,612,985 + 2.0
1,613,429 + 13406 mRNA_5038 0.84 -1.1
1,613,587 + 0.7
1,613,883 + 0.6
1,613,885 - -0.3
1,614,001 + 0.7
1,614,027 + -0.4
1,614,334 + -1.1
1,614,348 + 13407 mRNA_5039 0.12 -0.9