Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4945

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4944: 13312 - KOG1375 Beta tubulin, at 1374400 to 1376265 13312 mRNA_4945: 13313 - Hypothetical Protein, at 1376497 to 1378672 13313 mRNA_4946: 13314 - KOG0143 Iron/ascorbate family oxidoreductases, at 1378791 to 1380023 13314

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,375,574 - 13312 mRNA_4944 0.63 1.5
1,375,848 + 13312 mRNA_4944 0.78 0.7
1,375,859 + 13312 mRNA_4944 0.78 0.1
1,375,867 - 13312 mRNA_4944 0.79 1.3
1,376,005 + 13312 mRNA_4944 0.86 -0.3
1,376,010 + 13312 mRNA_4944 0.86 0.5
1,376,171 + 0.3
1,376,277 - 0.7
1,376,287 - 0.4
1,376,294 - 0.2
1,376,426 + 0.7
1,376,430 + 0.3
1,376,434 - 0.7
1,376,439 - -0.6
1,376,450 - 1.5
1,376,459 - -0.4
1,376,583 - 0.6
1,376,594 - 1.1
1,376,597 + 0.8
1,376,733 - 13313 mRNA_4945 0.11 0.3
1,376,753 + 13313 mRNA_4945 0.12 0.4
1,376,867 - 13313 mRNA_4945 0.17 -0.9
1,377,036 - 13313 mRNA_4945 0.25 0.6
1,377,042 + 13313 mRNA_4945 0.25 0.5
1,377,050 - 13313 mRNA_4945 0.25 1.2
1,377,095 + 13313 mRNA_4945 0.27 -0.2
1,377,599 - 13313 mRNA_4945 0.51 1.7
1,377,799 + 13313 mRNA_4945 0.60 0.7
1,378,368 + 13313 mRNA_4945 0.86 -0.1
1,378,499 + 0.5
1,378,514 - -0.0
1,378,625 + 1.2
1,378,810 + -0.9
1,378,911 + -0.5
1,379,064 + 13314 mRNA_4946 0.22 -0.4
1,379,369 - 13314 mRNA_4946 0.47 1.9
1,379,384 + 13314 mRNA_4946 0.48 0.5
1,379,503 + 13314 mRNA_4946 0.58 -1.0