Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4898

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4897: 13265 - K01759 GLO1, gloA lactoylglutathione lyase, at 1252541 to 1253295 13265 mRNA_4898: 13266 - HMMPfam-TAP-like protein-PF08386,SUPERFAMILY--SSF53474, at 1253666 to 1256190 13266 mRNA_4899: 13267 - KOG4705 Uncharacterized conserved protein, at 1256310 to 1257849 13267

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,253,111 + 13265 mRNA_4897 0.75 0.3
1,253,449 + -1.2
1,253,599 - 0.1
1,253,617 - 1.5
1,253,618 + 3.1
1,253,621 - 0.1
1,253,623 + -0.3
1,253,642 - -0.5
1,253,756 - 0.8
1,253,780 + -0.9
1,253,876 + -0.9
1,253,914 - 0.2
1,253,915 - 0.5
1,253,920 - 13266 mRNA_4898 0.10 -0.1
1,253,920 + 13266 mRNA_4898 0.10 1.0
1,253,924 - 13266 mRNA_4898 0.10 0.8
1,253,935 + 13266 mRNA_4898 0.11 0.5
1,254,661 + 13266 mRNA_4898 0.39 0.7
1,254,850 - 13266 mRNA_4898 0.47 -0.6
1,255,083 - 13266 mRNA_4898 0.56 -0.4
1,255,407 - 13266 mRNA_4898 0.69 -0.8
1,255,518 - 13266 mRNA_4898 0.73 0.6
1,255,554 + 13266 mRNA_4898 0.75 1.3
1,255,590 - 13266 mRNA_4898 0.76 -2.0
1,255,657 + 13266 mRNA_4898 0.79 0.1
1,255,685 - 13266 mRNA_4898 0.80 0.2
1,255,696 - 13266 mRNA_4898 0.80 -0.4
1,255,701 + 13266 mRNA_4898 0.81 0.5
1,255,824 + 13266 mRNA_4898 0.85 2.4
1,255,839 - 13266 mRNA_4898 0.86 -0.0
1,256,158 + 1.8
1,256,426 + 0.3