Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4639

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4638: 13006 - HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839,SUPERFAMILY--SSF52266, at 663192 to 664874 13006 mRNA_4639: 13007 - KOG3469 Cytochrome c oxidase, subunit VIa/COX13, at 665005 to 666466 13007 mRNA_4640: 13008 - KOG1399 Flavin-containing monooxygenase, at 666733 to 668799 13008

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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664,058 + 13006 mRNA_4638 0.51 0.3
664,311 + 13006 mRNA_4638 0.66 -0.1
664,505 - 13006 mRNA_4638 0.78 0.9
664,527 - 13006 mRNA_4638 0.79 -0.1
664,637 - 13006 mRNA_4638 0.86 0.6
664,641 + 13006 mRNA_4638 0.86 -1.5
664,647 - 13006 mRNA_4638 0.86 0.2
664,805 - 0.2
664,816 + 1.1
664,826 + -0.5
664,898 - 0.3
664,932 - 0.5
664,949 - 0.3
664,974 - 1.5
665,006 + 0.3
665,069 - -0.2
665,091 - -0.2
665,333 + 13007 mRNA_4639 0.22 0.5
665,367 - 13007 mRNA_4639 0.25 0.7
665,371 - 13007 mRNA_4639 0.25 -0.8
665,394 - 13007 mRNA_4639 0.27 -0.2
665,405 - 13007 mRNA_4639 0.27 0.3
665,409 + 13007 mRNA_4639 0.28 0.9
665,559 + 13007 mRNA_4639 0.38 -0.2
665,845 - 13007 mRNA_4639 0.57 1.0
665,974 - 13007 mRNA_4639 0.66 0.3
665,997 - 13007 mRNA_4639 0.68 -0.3
666,126 + 13007 mRNA_4639 0.77 0.8
666,260 + 13007 mRNA_4639 0.86 -0.9
666,556 + 1.5
667,259 - 13008 mRNA_4640 0.25 -0.3
667,377 - 13008 mRNA_4640 0.31 -0.2
667,415 + 13008 mRNA_4640 0.33 -0.7
667,416 + 13008 mRNA_4640 0.33 -0.9
667,433 - 13008 mRNA_4640 0.34 1.0