Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4605

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4604: 12972 - K10747 LIG1 DNA ligase 1, at 565709 to 567987 12972 mRNA_4605: 12973 - KOG0254 Predicted transporter (major facilitator superfamily), at 568226 to 569633 12973 mRNA_4606: 12974 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,ProSitePatterns-Zinc-containing alcohol dehydrogenases signature.-PS00059,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 569895 to 571183 12974

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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568,014 - 0.1
568,724 - 12973 mRNA_4605 0.35 3.0
569,009 + 12973 mRNA_4605 0.56 0.5
569,165 - 12973 mRNA_4605 0.67 1.2
570,031 - 12974 mRNA_4606 0.11 0.8
570,588 - 12974 mRNA_4606 0.54 -0.4
570,604 - 12974 mRNA_4606 0.55 0.1