Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4207

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4205: 12573 - K09276 YBX1, NSEP1 Y-box-binding protein 1, at 1609295 to 1611072 12573 mRNA_4206: 12574 - Hypothetical Protein, at 1611148 to 1611771 12574 mRNA_4207: 12575 - BLAST similar to An07g08470 [Aspergillus kawachii IFO 4308], at 1611743 to 1613207 12575 mRNA_4208: 12576 - K17919 SNX4 sorting nexin-4, at 1613612 to 1615514 12576

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,610,744 - 12573 mRNA_4205 0.81 -0.1
1,610,875 - 12573 mRNA_4205 0.89 1.0
1,610,879 + 12573 mRNA_4205 0.89 0.4
1,610,899 - -0.0
1,610,910 + 0.0
1,610,925 - 1.2
1,611,086 - 0.6
1,611,197 - 0.7
1,611,220 - 12574 mRNA_4206 0.12 0.5
1,611,236 + 12574 mRNA_4206 0.14 0.6
1,611,336 + 12574 mRNA_4206 0.30 0.8
1,611,374 - 12574 mRNA_4206 0.36 0.2
1,611,378 + 12574 mRNA_4206 0.37 0.5
1,611,510 - 12574 mRNA_4206 0.58 1.0
1,611,518 + 12574 mRNA_4206 0.59 0.3
1,611,519 - 12574 mRNA_4206 0.59 1.4
1,611,524 + 12574 mRNA_4206 0.60 0.8
1,611,526 - 12574 mRNA_4206 0.61 0.6
1,611,542 - 12574 mRNA_4206 0.63 -0.0
1,611,641 + 12574 mRNA_4206 0.79 0.3
1,611,647 + 12574 mRNA_4206 0.80 0.2
1,612,125 - 12575 mRNA_4207 0.26 0.0
1,612,129 + 12575 mRNA_4207 0.26 1.0
1,612,536 + 12575 mRNA_4207 0.54 0.1
1,612,675 + 12575 mRNA_4207 0.64 0.8
1,612,686 - 12575 mRNA_4207 0.64 -0.7
1,612,855 - 12575 mRNA_4207 0.76 0.5
1,612,978 - 12575 mRNA_4207 0.84 -0.0
1,612,991 - 12575 mRNA_4207 0.85 0.2
1,613,128 + 0.8
1,613,168 + -0.4
1,613,276 - -0.3
1,613,286 - -0.3
1,613,295 + -1.9
1,613,312 + -0.5
1,613,457 + -0.5
1,613,566 + -0.3
1,613,570 - 1.0
1,613,615 + 0.3
1,613,722 + -0.1