Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4197

Experiments: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4196: 12564 - K12343 SRD5A1 3-oxo-5-alpha-steroid 4-dehydrogenase 1, at 1586838 to 1587953 12564 mRNA_4197: 12565 - K00512 CYP17A steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone deacetylase, at 1588332 to 1590437 12565 mRNA_4198: 12566 - K00166 BCKDHA, bkdA1 2-oxoisovalerate dehydrogenase E1 component alpha subunit, at 1590487 to 1592266 12566

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
1,587,458 - 12564 mRNA_4196 0.56 -0.2
1,587,754 - 12564 mRNA_4196 0.82 -0.3
1,587,901 + -2.2
1,587,921 + -0.5
1,588,050 - 1.5
1,588,052 - -2.3
1,588,054 - -0.5
1,588,072 + 0.2
1,588,187 + 0.7
1,588,198 - 1.0
1,588,224 - -0.4
1,589,064 + 12565 mRNA_4197 0.35 -0.1
1,589,184 - 12565 mRNA_4197 0.40 2.2
1,589,387 - 12565 mRNA_4197 0.50 1.6
1,589,660 - 12565 mRNA_4197 0.63 -0.4
1,590,082 - 12565 mRNA_4197 0.83 -0.2
1,590,103 + 12565 mRNA_4197 0.84 -0.8
1,590,385 - -0.9
1,591,418 + 12566 mRNA_4198 0.52 -0.1
1,591,427 - 12566 mRNA_4198 0.53 0.8