Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4147

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4146: 12514 - Hypothetical Protein, at 1463545 to 1465730 12514 mRNA_4147: 12515 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,PRINTS-Adrenodoxin reductase family signature-PR00419,SUPERFAMILY--SSF51905, at 1466174 to 1468597 12515 mRNA_4148: 12516 - K00685 ATE1, ate1 arginine-tRNA-protein transferase, at 1468792 to 1470729 12516

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,465,196 - 12514 mRNA_4146 0.76 0.3
1,465,222 - 12514 mRNA_4146 0.77 -0.8
1,465,252 - 12514 mRNA_4146 0.78 -0.2
1,465,764 + 0.5
1,465,789 - 0.2
1,465,833 + -0.0
1,465,846 + -0.4
1,465,855 - -0.2
1,465,857 - 0.3
1,465,861 + 1.0
1,465,866 + -0.1
1,465,869 + 0.8
1,465,871 + 1.5
1,465,871 + 0.5
1,465,875 + -0.2
1,465,904 - 0.3
1,465,904 + -0.3
1,465,906 - 0.7
1,465,923 + 1.0
1,466,085 - -1.8
1,466,331 - 1.2
1,466,620 - 12515 mRNA_4147 0.18 -1.8
1,466,653 - 12515 mRNA_4147 0.20 -0.2
1,467,234 + 12515 mRNA_4147 0.44 0.3
1,467,319 + 12515 mRNA_4147 0.47 -0.3
1,467,321 - 12515 mRNA_4147 0.47 -0.3
1,467,662 + 12515 mRNA_4147 0.61 -0.8
1,467,920 - 12515 mRNA_4147 0.72 -1.5
1,468,304 - 12515 mRNA_4147 0.88 -1.2
1,468,658 + -0.3
1,468,699 + -0.7
1,469,073 + 12516 mRNA_4148 0.14 0.6
1,469,093 + 12516 mRNA_4148 0.16 -0.6
1,469,381 - 12516 mRNA_4148 0.30 -0.5