Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4145

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4144: 12512 - K01669 phrB deoxyribodipyrimidine photo-lyase, at 1457920 to 1460424 12512 mRNA_4145: 12513 - K00641 metX homoserine O-acetyltransferase, at 1460929 to 1462648 12513 mRNA_4146: 12514 - Hypothetical Protein, at 1463545 to 1465730 12514

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,460,073 + 12512 mRNA_4144 0.86 0.1
1,460,368 + 0.3
1,460,371 + 0.2
1,460,494 + -0.6
1,460,509 - 0.1
1,460,521 + -3.3
1,460,643 + -1.7
1,460,645 - 0.2
1,460,650 + -0.6
1,460,666 + 0.1
1,460,681 + 2.5
1,460,681 + 0.2
1,460,681 + 0.3
1,460,819 + 0.5
1,460,820 + 3.3
1,460,985 + -1.2
1,461,793 + 12513 mRNA_4145 0.50 -1.9
1,461,981 - 12513 mRNA_4145 0.61 -6.3
1,461,986 + 12513 mRNA_4145 0.61 -4.5
1,462,563 + -3.8
1,462,568 - -4.2
1,462,693 - -0.3
1,462,696 - -0.2
1,462,722 - 0.6
1,462,737 - 0.2
1,462,820 - 2.4
1,462,849 + 0.5
1,462,894 + 0.8
1,462,984 - 0.6
1,463,152 - 0.2
1,463,592 + 2.0