Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4071

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4070: 12438 - K02877 RP-L15e, RPL15 large subunit ribosomal protein L15e, at 1283511 to 1284371 12438 mRNA_4071: 12439 - BLAST putative upf0132 domain-containing protein [Diaporthe..., at 1285079 to 1285837 12439 mRNA_4072: 12440 - K16575 ACTR1, ARP1 centractin, at 1286521 to 1288236 12440

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,284,785 + 0.4
1,284,785 + -0.3
1,284,796 + 1.0
1,284,995 - 0.4
1,284,999 + 1.7
1,285,112 - 0.8
1,285,300 + 12439 mRNA_4071 0.29 0.7
1,285,427 - 12439 mRNA_4071 0.46 0.5
1,285,440 - 12439 mRNA_4071 0.48 -0.8
1,285,584 - 12439 mRNA_4071 0.67 1.2
1,285,868 - -0.1
1,285,876 - 0.5
1,286,147 - 0.3
1,286,148 - 1.9
1,286,154 + 0.8
1,286,161 - 0.2