Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3955

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3954: 12322 - KOG1426 FOG RCC1 domain, at 985055 to 988023 12322 mRNA_3955: 12323 - K02355 fusA, GFM, EFG elongation factor G, at 988308 to 991427 12323 mRNA_3956: 12324 - KOG1843 Uncharacterized conserved protein, at 991807 to 993961 12324

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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987,657 + 12322 mRNA_3954 0.88 1.4
987,847 + 1.9
988,046 + 0.7
988,161 - 0.7
988,164 + 0.4
988,167 + 1.7
988,170 - -1.2
988,174 + -0.4
988,188 + -0.2
988,199 + 0.9
989,157 - 12323 mRNA_3955 0.27 -2.1
991,503 - 0.2
991,978 - 0.5
992,291 + 12324 mRNA_3956 0.22 0.5
992,293 - 12324 mRNA_3956 0.23 0.1
992,427 + 12324 mRNA_3956 0.29 -0.2