Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3935

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3934: 12302 - K01955 carB, CPA2 carbamoyl-phosphate synthase large subunit, at 940362 to 944260 12302 mRNA_3935: 12303 - HMMPfam-ER protein Pkr1-PF08636, at 944779 to 945196 12303 mRNA_3936: 12304 - Hypothetical Protein, at 945661 to 946219 12304

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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944,022 - -0.2
944,261 - -1.8
944,525 + 0.7
944,756 + 0.2
945,105 - 12303 mRNA_3935 0.78 0.3
945,141 - 12303 mRNA_3935 0.87 -0.4
945,225 + -0.0
945,231 + 0.0
945,233 + -0.3
945,252 - 0.3
945,253 + -0.9
945,268 - -0.0
945,352 - 0.7
945,403 - -0.6
945,404 - -1.2
945,404 - 1.1
945,542 - -0.1
945,546 - -0.6
945,548 + 0.6
945,549 + -1.6
945,562 + 2.3
945,880 + 12304 mRNA_3936 0.39 0.2
946,093 - 12304 mRNA_3936 0.77 -1.8