Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3882

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3881: 12249 - Hypothetical Protein, at 814368 to 814862 12249 mRNA_3882: 12250 - Hypothetical Protein, at 815200 to 816864 12250 mRNA_3883: 12251 - K01784 galE, GALE UDP-glucose 4-epimerase, at 817567 to 820111 12251

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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814,304 + -1.4
814,305 - -0.2
814,316 + 1.0
814,317 - -0.8
814,320 - 0.1
814,333 + 0.6
814,334 + -0.2
814,356 + 0.4
814,386 - 2.2
814,398 - 0.3
814,402 - 0.9
814,405 + -1.0
814,421 - 12249 mRNA_3881 0.11 -0.7
814,422 + 12249 mRNA_3881 0.11 -0.3
814,472 - 12249 mRNA_3881 0.21 1.4
814,477 + 12249 mRNA_3881 0.22 0.2
814,478 - 12249 mRNA_3881 0.22 -0.1
814,492 - 12249 mRNA_3881 0.25 0.1
814,492 + 12249 mRNA_3881 0.25 -0.8
814,499 + 12249 mRNA_3881 0.26 -0.2
814,506 - 12249 mRNA_3881 0.28 0.7
814,529 - 12249 mRNA_3881 0.33 0.0
814,539 + 12249 mRNA_3881 0.35 0.6
814,582 - 12249 mRNA_3881 0.43 1.1
814,651 - 12249 mRNA_3881 0.57 3.1
814,799 - 12249 mRNA_3881 0.87 0.9
814,806 - 12249 mRNA_3881 0.88 1.0
814,806 - 12249 mRNA_3881 0.88 0.3
814,942 + -0.4
814,943 - -0.3
814,951 - 0.6
814,973 + -0.2
815,124 - -0.0
815,731 + 12250 mRNA_3882 0.32 -0.2
815,856 + 12250 mRNA_3882 0.39 -0.4
816,006 + 12250 mRNA_3882 0.48 0.6
816,016 - 12250 mRNA_3882 0.49 -1.3
816,560 - 12250 mRNA_3882 0.82 0.2
816,591 - 12250 mRNA_3882 0.84 0.4
816,601 + 12250 mRNA_3882 0.84 0.5
816,851 + 0.7
816,857 + -0.6
816,865 + -0.5
816,904 - 0.7
816,915 - 0.7
817,016 + 0.7
817,037 - -0.5
817,040 + -0.6
817,041 - -1.1
817,054 - 1.5
817,060 - -1.0
817,063 + -1.3
817,068 + -1.4
817,068 + 0.1
817,104 + -0.7
817,111 + 1.6
817,112 - 0.6
817,115 + 0.4
817,133 + 0.2
817,141 + 1.9
817,161 - -0.4
817,168 + 0.1
817,169 - -0.6
817,179 + 0.7
817,183 - 0.8
817,195 - -1.5
817,196 + 1.5
817,201 + 0.7
817,274 - 0.1
817,344 + -0.2
817,351 + 0.5
817,372 + 0.3
817,383 + 0.4
817,489 - -0.1
817,501 - -0.7
817,503 + 0.1
817,512 + 0.8
817,518 - -1.8
817,623 - 1.4
817,646 + 0.4
817,651 + -0.7
817,660 + 0.8
817,694 + 0.3
817,831 - 12251 mRNA_3883 0.10 0.3