Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3879

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3878: 12246 - K07975 K07975 Rho family, other, at 809804 to 811045 12246 mRNA_3879: 12247 - Interpro Selenoprotein SelK_SelG, at 811174 to 811650 12247 mRNA_3880: 12248 - K00262 E1.4.1.4, gdhA glutamate dehydrogenase (NADP+), at 812217 to 813988 12248

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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810,235 - 12246 mRNA_3878 0.35 -2.8
810,299 - 12246 mRNA_3878 0.40 0.2
810,422 + 12246 mRNA_3878 0.50 0.9
810,493 - 12246 mRNA_3878 0.55 0.7
810,735 + 12246 mRNA_3878 0.75 0.1
810,811 - 12246 mRNA_3878 0.81 -0.1
811,149 - -0.2
811,152 - -0.4
811,153 + 0.8
811,159 - 0.9
811,171 - -0.7
811,171 - 0.4
811,171 - -0.4
811,176 + 0.1
811,179 - 1.1
811,180 - -1.0
811,180 + -0.3
811,181 + 0.1
811,181 + 1.2
811,185 + -0.3
811,271 + 12247 mRNA_3879 0.20 2.0
811,297 - 12247 mRNA_3879 0.26 1.8
811,303 - 12247 mRNA_3879 0.27 1.0
811,593 - 12247 mRNA_3879 0.88 1.1
811,603 - 0.8
811,625 + -0.7
812,620 + 12248 mRNA_3880 0.23 0.7