Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3857

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3856: 12224 - Hypothetical Protein, at 752921 to 753919 12224 mRNA_3857: 12225 - Interpro Mysoin-binding motif of peroxisomes, at 754082 to 757282 12225 mRNA_3858: 12226 - K17890 ATG16L1 autophagy-related protein 16-1, at 757885 to 761783 12226

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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753,282 + 12224 mRNA_3856 0.36 -0.1
753,655 - 12224 mRNA_3856 0.73 -0.7
753,812 - 12224 mRNA_3856 0.89 -0.0
753,817 - 12224 mRNA_3856 0.90 -0.3
755,751 + 12225 mRNA_3857 0.52 1.6
755,850 + 12225 mRNA_3857 0.55 0.7
756,191 + 12225 mRNA_3857 0.66 -0.1
756,935 - 12225 mRNA_3857 0.89 -1.6
757,046 + -1.4
757,414 + 0.2
757,514 - 0.1
757,514 + -0.2
757,681 + -1.5
757,945 - -1.1
757,947 - 1.8
758,100 + 1.6
758,250 - 2.2