Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3585

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3584: 11952 - K00122 FDH formate dehydrogenase, at 104607 to 106241 11952 mRNA_3585: 11953 - KOG1339 Aspartyl protease, at 106973 to 108703 11953

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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106,048 - 11952 mRNA_3584 0.88 0.2
106,160 - -0.0
106,325 - 1.8
106,343 - 0.2
106,344 - 0.7
106,348 + -0.2
106,352 - 0.9
106,359 + -0.2
106,362 + 1.6
106,362 + -0.3
106,373 - -0.6
106,379 + -0.5
106,380 + -0.1
106,388 + -0.1
106,397 + 1.5
106,400 - -0.2
106,412 + -0.6
106,412 - -0.3
106,416 + -0.8
106,417 + -0.2
106,441 - 2.5
106,445 + -0.7
106,459 - -0.4
106,489 + 0.3
106,490 - -0.1
106,500 - 0.2
106,505 - -0.8
106,507 + 0.6
106,511 - -0.2
106,519 + -0.0
106,541 - -0.3
106,542 + 1.8
106,555 + -0.5
106,654 + 0.9
106,799 - -0.6
106,808 - 0.3
106,822 + 1.9
107,061 - -0.2
107,107 + 1.1
107,365 - 11953 mRNA_3585 0.23 1.3
108,019 + 11953 mRNA_3585 0.60 -3.4
108,816 - 0.6
108,824 + 2.7
108,860 - 0.7
109,033 + -0.5
109,088 + -0.5
109,101 - 0.4
109,112 - 0.9
109,132 - 0.4
109,191 + 1.9
109,232 + 1.0
109,253 - -1.0
109,262 - -0.8
109,360 + 0.7
109,398 - 0.1
109,398 + -0.5
109,403 + -0.4
109,410 - 1.8
109,414 + 1.2
109,432 - 0.6
109,468 - 1.5
109,470 - 0.8
109,477 + -0.1
109,547 + 0.3
109,567 + -0.9
109,574 - -0.0
109,577 + 1.1
109,585 - -1.2
109,586 - -0.3
109,623 - -0.7
109,646 + 1.2
109,666 - 0.3