Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3537

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3537: 11905 - Hypothetical Protein, at 102 to 917 11905

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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2 + -0.4
2 + 1.0
2 + -0.7
2 + 0.0
2 + 0.4
2 + 0.1
2 + -1.5
14 + 0.7
26 + 0.7
36 + 2.2
39 + -2.1
42 - -0.6
50 + 0.7
50 + -0.3
50 + 0.3
53 - -1.1
57 + 1.8
59 - 2.3
103 + 0.3
104 + 0.5
112 + 1.1
117 - 0.3
120 - -0.5
140 - -0.6
141 + -0.5
146 + 0.4
150 + -0.3
199 - 11905 mRNA_3537 0.12 0.8
200 + 11905 mRNA_3537 0.12 -0.2
200 - 11905 mRNA_3537 0.12 1.4
200 - 11905 mRNA_3537 0.12 -1.6
200 - 11905 mRNA_3537 0.12 -1.2
201 - 11905 mRNA_3537 0.12 -1.3
207 + 11905 mRNA_3537 0.13 1.3
207 + 11905 mRNA_3537 0.13 -0.3
207 + 11905 mRNA_3537 0.13 1.5
209 + 11905 mRNA_3537 0.13 0.6
210 + 11905 mRNA_3537 0.13 -0.7
213 + 11905 mRNA_3537 0.14 0.4
213 + 11905 mRNA_3537 0.14 -0.2
214 + 11905 mRNA_3537 0.14 -0.4
214 + 11905 mRNA_3537 0.14 -0.0
218 + 11905 mRNA_3537 0.14 2.8
221 + 11905 mRNA_3537 0.15 -0.8
222 + 11905 mRNA_3537 0.15 -0.6
222 + 11905 mRNA_3537 0.15 0.5
222 + 11905 mRNA_3537 0.15 -0.3
223 - 11905 mRNA_3537 0.15 -0.6
225 - 11905 mRNA_3537 0.15 -1.0
227 - 11905 mRNA_3537 0.15 0.9
227 + 11905 mRNA_3537 0.15 -0.6
230 + 11905 mRNA_3537 0.16 2.4
230 + 11905 mRNA_3537 0.16 0.9
246 - 11905 mRNA_3537 0.18 0.4
246 - 11905 mRNA_3537 0.18 -0.8
251 + 11905 mRNA_3537 0.18 -0.3
252 + 11905 mRNA_3537 0.18 1.2
260 + 11905 mRNA_3537 0.19 -0.6
262 + 11905 mRNA_3537 0.20 -1.1
265 - 11905 mRNA_3537 0.20 1.1
272 - 11905 mRNA_3537 0.21 0.4
274 + 11905 mRNA_3537 0.21 -0.6
325 - 11905 mRNA_3537 0.27 0.2
326 - 11905 mRNA_3537 0.27 0.2
341 + 11905 mRNA_3537 0.29 -0.2
359 + 11905 mRNA_3537 0.31 0.0
362 + 11905 mRNA_3537 0.32 -0.0
367 - 11905 mRNA_3537 0.32 0.2
368 + 11905 mRNA_3537 0.33 -0.2
368 + 11905 mRNA_3537 0.33 -1.1
368 + 11905 mRNA_3537 0.33 -1.2
373 + 11905 mRNA_3537 0.33 1.3
373 - 11905 mRNA_3537 0.33 -0.6
373 - 11905 mRNA_3537 0.33 0.3
379 + 11905 mRNA_3537 0.34 0.2
380 + 11905 mRNA_3537 0.34 0.2
417 + 11905 mRNA_3537 0.39 1.0
452 + 11905 mRNA_3537 0.43 -0.2
472 + 11905 mRNA_3537 0.45 -0.9
484 + 11905 mRNA_3537 0.47 -2.6
489 - 11905 mRNA_3537 0.47 -0.7
503 - 11905 mRNA_3537 0.49 -0.3
511 + 11905 mRNA_3537 0.50 0.7
518 + 11905 mRNA_3537 0.51 0.1
523 + 11905 mRNA_3537 0.52 1.0
533 + 11905 mRNA_3537 0.53 0.5
539 + 11905 mRNA_3537 0.54 -0.3
550 + 11905 mRNA_3537 0.55 0.9
579 + 11905 mRNA_3537 0.58 0.1
638 - 11905 mRNA_3537 0.66 0.1
640 - 11905 mRNA_3537 0.66 0.9
657 + 11905 mRNA_3537 0.68 0.2
762 - 11905 mRNA_3537 0.81 -3.5
768 + 11905 mRNA_3537 0.82 0.5
791 - 11905 mRNA_3537 0.84 0.2
801 + 11905 mRNA_3537 0.86 0.3
804 + 11905 mRNA_3537 0.86 1.1
822 + 11905 mRNA_3537 0.88 1.1
827 + 11905 mRNA_3537 0.89 0.3
842 + 0.6
842 + 1.7
845 - 0.8
962 - 0.5
990 + 0.1
1,074 + -2.2
1,080 - 0.4
1,107 + -0.1
1,110 - -0.6
1,123 + 2.0
1,143 + -0.2
1,256 - 0.4
1,278 + -1.5
1,336 + 0.3
1,371 - -0.2
1,404 - 0.3
1,429 + -1.3
1,450 + -0.8
1,528 + 0.9
1,550 + 0.2
1,647 - 0.3
1,653 + 1.0
1,661 - 1.0
1,663 + 0.1
1,719 + 0.2
1,720 + 0.1
1,760 + 0.5
1,814 - 1.2
1,902 - 1.1