Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3466

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3465: 11833 - KOG1176 Acyl-CoA synthetase, at 166819 to 169091 11833 mRNA_3466: 11834 - HMMPfam-Sds3-like-PF08598, at 169311 to 170947 11834

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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168,413 + 11833 mRNA_3465 0.70 0.9
168,547 + 11833 mRNA_3465 0.76 0.7
168,683 - 11833 mRNA_3465 0.82 0.0
168,725 + 11833 mRNA_3465 0.84 0.4
168,853 + 11833 mRNA_3465 0.89 0.1
168,861 - 11833 mRNA_3465 0.90 0.3
168,997 - 0.9
169,000 + 0.5
169,011 - 0.5
169,033 + 1.2
169,039 - 0.6
169,146 - 0.3
169,149 - 0.1
169,153 - -0.4
169,163 + -0.4
169,174 - 0.8
169,179 + -0.1
169,179 + -0.5
169,202 + -0.9
169,208 + 1.0
169,216 - -0.8
169,218 + 1.1
169,253 + 0.6
169,506 - 11834 mRNA_3466 0.12 -0.6
169,543 + 11834 mRNA_3466 0.14 -0.6
169,787 + 11834 mRNA_3466 0.29 -1.4
169,811 - 11834 mRNA_3466 0.31 -0.8
169,940 - 11834 mRNA_3466 0.38 0.3
170,028 - 11834 mRNA_3466 0.44 0.0
170,219 + 11834 mRNA_3466 0.55 1.0
170,275 - 11834 mRNA_3466 0.59 1.7
170,396 + 11834 mRNA_3466 0.66 0.9