Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3108

Experiments: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3107: 11475 - K11412 SIRT2, SIR2L2 NAD-dependent deacetylase sirtuin 2, at 339155 to 340730 11475 mRNA_3108: 11476 - KOG2203 GTP-binding protein, at 340842 to 344399 11476 mRNA_3109: 11477 - K13172 SRRM2, SRM300 serine/arginine repetitive matrix protein 2, at 344614 to 345945 11477

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
339,885 - 11475 mRNA_3107 0.46 2.1
339,899 - 11475 mRNA_3107 0.47 -0.1
340,066 - 11475 mRNA_3107 0.58 2.4
340,193 - 11475 mRNA_3107 0.66 1.3
340,195 - 11475 mRNA_3107 0.66 0.3
340,288 - 11475 mRNA_3107 0.72 3.0
340,635 + 0.9
340,676 - 1.6
340,790 - -0.5
340,907 - -1.3
341,035 - -2.1
341,059 - -0.8
341,067 + -1.5
341,086 - 1.2
341,250 + 11476 mRNA_3108 0.11 -0.7
341,659 + 11476 mRNA_3108 0.23 1.1
341,682 + 11476 mRNA_3108 0.24 1.2
341,785 + 11476 mRNA_3108 0.27 0.4
341,810 - 11476 mRNA_3108 0.27 0.6
342,229 + 11476 mRNA_3108 0.39 0.8
342,398 + 11476 mRNA_3108 0.44 2.0
342,416 - 11476 mRNA_3108 0.44 -0.5
342,490 - 11476 mRNA_3108 0.46 0.4
342,511 + 11476 mRNA_3108 0.47 -0.8
342,529 + 11476 mRNA_3108 0.47 0.2
342,802 - 11476 mRNA_3108 0.55 -0.5
342,827 + 11476 mRNA_3108 0.56 -0.0
342,975 + 11476 mRNA_3108 0.60 0.2
342,985 - 11476 mRNA_3108 0.60 0.2
343,106 - 11476 mRNA_3108 0.64 -0.3
343,277 + 11476 mRNA_3108 0.68 0.7
343,306 + 11476 mRNA_3108 0.69 0.7
343,565 + 11476 mRNA_3108 0.77 0.2
343,597 + 11476 mRNA_3108 0.77 0.7
343,695 + 11476 mRNA_3108 0.80 1.3
343,859 - 11476 mRNA_3108 0.85 0.7
344,002 - 11476 mRNA_3108 0.89 0.2
344,131 - -1.0
344,132 + 1.1
344,134 + 0.7
344,135 - -0.5
344,142 - -0.1
344,155 - -0.1
344,269 + -0.7
344,277 - -0.0
344,283 + 1.3
344,292 - 1.2
344,292 - 0.1
344,298 - -1.9
344,299 + -2.6
344,302 + 0.5
344,306 + -0.3
344,437 - 0.1
344,438 - 0.3
344,439 - 2.0
344,451 - -0.1
344,451 + 1.3
344,457 + 0.7
344,457 - 1.8
344,458 + 0.7
344,549 - -0.7
344,575 - 0.1
344,575 + 0.3
344,582 - -0.2
344,584 - -0.7
344,586 - 0.7
344,588 - 0.1
344,589 + -0.6
344,595 - -1.2
344,596 + 0.1
344,603 + 1.0
344,614 + 1.3
344,733 - -0.5
344,741 + 0.6
344,746 - 0.4
344,749 + 11477 mRNA_3109 0.10 0.3
344,864 - 11477 mRNA_3109 0.19 0.4
344,872 - 11477 mRNA_3109 0.19 -0.1
344,875 + 11477 mRNA_3109 0.20 0.5
344,901 + 11477 mRNA_3109 0.22 1.1
345,007 - 11477 mRNA_3109 0.30 1.4
345,018 + 11477 mRNA_3109 0.30 2.3
345,042 + 11477 mRNA_3109 0.32 0.3
345,060 - 11477 mRNA_3109 0.33 -0.1
345,141 - 11477 mRNA_3109 0.40 0.2
345,142 + 11477 mRNA_3109 0.40 -0.7
345,165 + 11477 mRNA_3109 0.41 0.4
345,306 - 11477 mRNA_3109 0.52 0.1