Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3059

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3059: 11427 - Hypothetical Protein, at 217589 to 219191 11427 mRNA_3060: 11428 - K13115 CCDC130 coiled-coil domain-containing protein 130, at 219691 to 221317 11428

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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216,674 + -0.1
216,742 + 0.3
216,837 - 1.6
216,865 - -0.7
216,868 - 0.6
216,879 + 0.8
216,882 + 0.2
216,884 - 0.1
217,004 + 0.0
217,009 - 1.8
217,011 - 0.2
217,029 - 0.6
217,032 + 0.1
217,035 - -1.1
217,037 + 0.1
217,038 + -0.6
217,045 - -0.7
217,152 - 0.2
217,173 + -0.6
217,193 + 0.2
217,252 - -1.0
217,317 + 0.3
217,461 - 0.3
217,464 + -0.5
217,470 - 0.3
217,470 - 0.2
217,475 + 1.2
217,636 + 0.9
217,909 + 11427 mRNA_3059 0.20 1.0
217,927 - 11427 mRNA_3059 0.21 -0.0
218,062 + 11427 mRNA_3059 0.30 1.3
218,066 + 11427 mRNA_3059 0.30 1.1
218,147 - 11427 mRNA_3059 0.35 1.3
218,168 + 11427 mRNA_3059 0.36 1.0
218,203 - 11427 mRNA_3059 0.38 1.2
218,447 - 11427 mRNA_3059 0.54 -0.3
218,618 + 11427 mRNA_3059 0.64 -0.1
218,635 - 11427 mRNA_3059 0.65 0.2
218,649 + 11427 mRNA_3059 0.66 0.9
218,747 + 11427 mRNA_3059 0.72 1.5
218,798 - 11427 mRNA_3059 0.75 0.4
218,892 - 11427 mRNA_3059 0.81 0.2
218,996 + 11427 mRNA_3059 0.88 -1.7
219,037 + 0.3
219,182 - 0.5
219,183 - 1.0
219,309 - 0.6
219,330 - -0.5
219,331 - 0.3
219,346 - -2.6
219,346 - 1.1
219,347 + -2.3
219,451 - 2.0
219,453 + 0.0
219,467 - -0.5
219,484 - 0.2
219,501 - -0.7
219,513 + 1.1
219,624 - -0.4
219,630 + -0.5
219,630 + -0.0
219,637 + 1.3
219,639 + 0.1
219,753 - 1.0
219,759 - -0.2
219,763 + -0.4
219,765 - 0.3
219,768 - 1.3
219,773 + 1.6
219,780 - 1.2
219,902 - 11428 mRNA_3060 0.13 0.7
219,902 - 11428 mRNA_3060 0.13 0.6
219,903 + 11428 mRNA_3060 0.13 0.1
219,908 + 11428 mRNA_3060 0.13 0.5
219,931 + 11428 mRNA_3060 0.15 0.4
220,038 - 11428 mRNA_3060 0.21 0.2
220,082 + 11428 mRNA_3060 0.24 0.7