Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3006

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3005: 11373 - K19708 PTC6, AUP1 protein phosphatase PTC6, at 54754 to 56074 11373 mRNA_3006: 11374 - K03259 EIF4E translation initiation factor 4E, at 56733 to 57511 11374 mRNA_3007: 11375 - K15119 SLC25A39_40 solute carrier family 25, member 39/40, at 57781 to 59867 11375

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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55,962 + 0.5
55,991 + -0.1
56,184 - 0.3
56,241 + 2.5
56,532 + 1.1
56,572 + 1.3
56,723 - 0.1
56,876 + 11374 mRNA_3006 0.18 -0.0
56,979 + 11374 mRNA_3006 0.32 -0.0
57,117 - 11374 mRNA_3006 0.49 0.4
57,261 + 11374 mRNA_3006 0.68 1.5
57,408 - 11374 mRNA_3006 0.87 -0.9
57,414 + 11374 mRNA_3006 0.87 0.6
57,416 - 11374 mRNA_3006 0.88 0.1
57,551 + 1.2
57,591 - 0.6
57,699 - 0.6
57,718 - -0.3
57,721 + 0.5
57,763 - 2.6
57,848 + 0.3