Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2980

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2980: 11348 - KOG3140 Predicted membrane protein, at 23 to 1444 11348

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1 + 1.1
1 + 0.1
1 + -0.6
21 + 0.9
21 + 1.1
21 + -0.9
41 + 0.8
42 + 0.2
44 + 3.1
79 - 0.4
79 + 1.3
149 - 2.5
264 + 11348 mRNA_2980 0.17 2.2
266 - 11348 mRNA_2980 0.17 0.4
338 - 11348 mRNA_2980 0.22 -0.2
341 + 11348 mRNA_2980 0.22 1.0
454 - 11348 mRNA_2980 0.30 3.3
484 - 11348 mRNA_2980 0.32 1.0
489 - 11348 mRNA_2980 0.33 0.8
491 + 11348 mRNA_2980 0.33 0.7
507 + 11348 mRNA_2980 0.34 2.2
510 + 11348 mRNA_2980 0.34 0.5
516 - 11348 mRNA_2980 0.35 0.1
654 + 11348 mRNA_2980 0.44 0.4
719 + 11348 mRNA_2980 0.49 1.2
1,007 + 11348 mRNA_2980 0.69 0.0
1,048 - 11348 mRNA_2980 0.72 0.3
1,218 - 11348 mRNA_2980 0.84 0.2
1,248 + 11348 mRNA_2980 0.86 2.6
1,364 + 0.9
1,374 - -0.4
1,401 + 2.5
1,452 + 0.2
1,488 - 0.2
1,503 + 0.3
1,513 + 1.2
1,515 - 0.2
1,551 + -1.8
1,634 + 0.9
1,635 + 0.0
1,657 + 0.3
1,668 + 0.1
1,805 - 1.7
1,805 + 0.5
1,818 + 0.1
1,882 + -0.3
1,934 + -0.1
1,948 + -0.5
1,949 - 0.5
1,974 + -0.2
1,992 + -0.7
1,992 + 1.4
1,993 + 1.4
2,011 + 0.8
2,082 + 0.3
2,084 - -0.3
2,086 + 3.0
2,086 + -0.7
2,086 + -0.2
2,095 + 0.6
2,097 - 1.7
2,098 + 1.8
2,115 + 0.1
2,117 + 1.7
2,120 + 0.4
2,121 - 0.3
2,121 - -0.2
2,125 - 0.9
2,126 + 1.0
2,131 + -0.0
2,131 + 0.4
2,131 + 1.7
2,133 + -0.7
2,243 + 0.4
2,265 + 1.5
2,301 + -0.2
2,320 + 1.1
2,324 - -1.0
2,357 + -0.7