Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2964

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2964: 11332 - K00965 galT, GALT UDPglucose--hexose-1-phosphate uridylyltransferase, at 664147 to 666205 11332 mRNA_2965: 11333 - KOG1721 FOG Zn-finger, at 666702 to 669525 11333

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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663,186 - 0.8
663,190 - 0.1
663,193 + 0.2
663,196 - -0.8
663,205 + 2.7
663,209 + -0.6
663,219 + 1.1
663,220 - 0.2
663,221 - 2.0
663,226 + 0.8
663,228 - 0.8
663,230 - -0.1
663,233 - -0.7
663,233 + -0.2
663,236 + -0.0
663,240 + 1.8
663,243 + 0.1
663,249 + -0.0
663,368 + 0.1
663,405 - -0.4
663,425 + -0.4
663,436 - -1.1
663,499 + -0.2
663,508 - 0.2
663,680 - 0.2
663,692 + 0.0
663,848 + 0.4
663,974 + 0.8
664,076 - -0.0
664,101 - -0.7
664,119 + 0.8
664,209 - -0.1
664,241 - 1.6
664,256 + 1.8
664,258 + 0.2
664,273 + -1.9
664,359 + 11332 mRNA_2964 0.10 0.6
664,538 + 11332 mRNA_2964 0.19 0.5
664,686 - 11332 mRNA_2964 0.26 0.0
664,690 + 11332 mRNA_2964 0.26 1.1
664,853 + 11332 mRNA_2964 0.34 -0.2
664,972 - 11332 mRNA_2964 0.40 0.5
665,018 + 11332 mRNA_2964 0.42 -1.3
665,274 + 11332 mRNA_2964 0.55 -1.0
665,284 + 11332 mRNA_2964 0.55 0.7
665,285 - 11332 mRNA_2964 0.55 0.1
665,399 - 11332 mRNA_2964 0.61 -0.6
665,563 + 11332 mRNA_2964 0.69 1.1
665,693 - 11332 mRNA_2964 0.75 2.3
665,842 + 11332 mRNA_2964 0.82 0.8
666,254 - -0.6
666,271 + -0.8
666,423 + -0.0
666,551 - 1.3
666,612 - -0.7
666,632 + 0.5
666,634 - -0.4
666,673 + -0.0
666,702 + -0.7
666,930 + -1.2
667,019 + 11333 mRNA_2965 0.11 1.7