Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2918

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2918: 11286 - HMMPfam-Acetyltransferase (GNAT) domain-PF13523,SMART-Siderophore biosynthesis protein domain-SM01006,SUPERFAMILY--SSF55729, at 554033 to 555107 11286 mRNA_2919: 11287 - BLAST Protein FAM186A [Mus musculus] [Rhizoctonia solani], at 555842 to 558142 11287

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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553,042 - 1.5
553,077 + 1.1
553,126 + 1.3
553,265 - -1.6
553,268 - -0.5
553,274 - 0.4
553,284 + -1.4
553,284 - -0.4
553,335 + -1.7
553,339 + -1.2
553,342 + -0.2
553,431 + 0.4
553,433 + 0.6
553,468 + 0.4
553,574 - 1.1
553,580 - 0.2
553,580 - 0.4
553,590 + 0.5
553,597 + 0.5
553,692 + -0.8
553,800 + -0.1
553,869 + 1.1
553,887 + 0.6
554,152 + 11286 mRNA_2918 0.11 -0.1
554,435 - 11286 mRNA_2918 0.37 0.1
554,460 - 11286 mRNA_2918 0.40 1.3
555,123 + 1.7
555,321 + -0.3
555,463 - 0.8
555,478 + 2.2
555,770 + 0.1
555,770 + 0.6
555,773 - -0.0
555,790 + -0.4
555,807 + 2.1
555,940 + -0.4
555,968 + 0.4
556,080 - 11287 mRNA_2919 0.10 -0.2
556,092 + 11287 mRNA_2919 0.11 -0.1