Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2791

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2790: 11158 - Hypothetical Protein, at 219629 to 222406 11158 mRNA_2791: 11159 - K05544 DUS3 tRNA-dihydrouridine synthase 3, at 222568 to 225746 11159 mRNA_2792: 11160 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 226043 to 228012 11160

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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221,661 + 11158 mRNA_2790 0.73 0.2
221,753 - 11158 mRNA_2790 0.76 -0.2
221,835 + 11158 mRNA_2790 0.79 -0.3
221,875 + 11158 mRNA_2790 0.81 1.7
222,068 + 11158 mRNA_2790 0.88 -0.0
222,508 - 0.6
222,521 + 1.0
222,792 + 1.6
223,077 + 11159 mRNA_2791 0.16 -1.1
223,258 - 11159 mRNA_2791 0.22 0.7
223,376 + 11159 mRNA_2791 0.25 1.1
223,376 + 11159 mRNA_2791 0.25 -0.9
223,607 + 11159 mRNA_2791 0.33 -0.8
223,691 + 11159 mRNA_2791 0.35 -0.2
223,743 - 11159 mRNA_2791 0.37 -0.4
223,951 - 11159 mRNA_2791 0.44 0.1
223,971 - 11159 mRNA_2791 0.44 0.5
224,118 - 11159 mRNA_2791 0.49 0.0
224,167 + 11159 mRNA_2791 0.50 -0.4
224,190 + 11159 mRNA_2791 0.51 0.7
224,497 + 11159 mRNA_2791 0.61 0.7
224,690 + 11159 mRNA_2791 0.67 -0.1
224,854 - 11159 mRNA_2791 0.72 -1.8
224,875 - 11159 mRNA_2791 0.73 -0.1
225,026 - 11159 mRNA_2791 0.77 0.1
225,092 + 11159 mRNA_2791 0.79 -1.1
225,245 + 11159 mRNA_2791 0.84 0.3
225,328 + 11159 mRNA_2791 0.87 1.1
225,407 - 11159 mRNA_2791 0.89 0.3
225,715 + 0.8
225,717 - 1.9
226,194 + -0.4
226,424 - 11160 mRNA_2792 0.19 -0.3
226,426 - 11160 mRNA_2792 0.19 -2.4
226,629 + 11160 mRNA_2792 0.30 0.4
226,710 - 11160 mRNA_2792 0.34 0.6
226,734 - 11160 mRNA_2792 0.35 -0.6