Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2718

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2717: 11085 - HMMPfam-Nitronate monooxygenase-PF03060,SUPERFAMILY--SSF51412, at 71439 to 72597 11085 mRNA_2718: 11086 - SUPERFAMILY--SSF50475, at 72649 to 73814 11086 mRNA_2719: 11087 - Hypothetical Protein, at 74043 to 75833 11087

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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71,843 - 11085 mRNA_2717 0.35 -0.2
71,952 + 11085 mRNA_2717 0.44 0.7
72,350 + 11085 mRNA_2717 0.79 -0.8
72,407 - 11085 mRNA_2717 0.84 0.5
72,468 - 11085 mRNA_2717 0.89 1.1
72,536 + 0.0
72,536 + 0.1
72,547 - 0.0
72,556 + 0.7
72,563 + -0.3
72,669 + -1.0
72,837 - 11086 mRNA_2718 0.16 0.3
72,882 + 11086 mRNA_2718 0.20 1.1
72,887 + 11086 mRNA_2718 0.20 0.2
72,887 + 11086 mRNA_2718 0.20 -0.5
73,025 + 11086 mRNA_2718 0.32 -0.0
73,147 + 11086 mRNA_2718 0.43 -0.0
73,399 + 11086 mRNA_2718 0.64 0.6
73,415 + 11086 mRNA_2718 0.66 2.0
73,445 - 11086 mRNA_2718 0.68 1.2
73,452 - 11086 mRNA_2718 0.69 1.3
73,538 + 11086 mRNA_2718 0.76 1.5
73,553 - 11086 mRNA_2718 0.78 -0.3
73,583 + 11086 mRNA_2718 0.80 2.2
73,697 - 11086 mRNA_2718 0.90 0.6
73,700 - 2.0
73,718 - 0.2
73,756 + 0.3
73,827 - 0.8
73,844 + 0.8
73,989 - -0.4
73,992 + 0.1
73,996 + -0.1
73,997 + -0.1
74,005 + 2.0
74,008 - 1.7
74,011 - -1.0
74,015 - 0.0
74,023 - 0.4
74,051 - 0.5
74,074 - 2.2
74,075 + 0.2
74,079 + 2.8
74,092 + -0.2
74,094 + 1.6
74,126 + -0.3
74,184 + -0.1
74,188 + 0.8
74,236 - 11087 mRNA_2719 0.11 0.5
74,242 - 11087 mRNA_2719 0.11 0.8
74,246 + 11087 mRNA_2719 0.11 0.9
74,250 + 11087 mRNA_2719 0.12 1.8
74,252 + 11087 mRNA_2719 0.12 -1.1
74,258 + 11087 mRNA_2719 0.12 -3.9
74,265 + 11087 mRNA_2719 0.12 -1.0
74,267 + 11087 mRNA_2719 0.13 -0.1
74,269 + 11087 mRNA_2719 0.13 0.7
74,390 - 11087 mRNA_2719 0.19 0.5
74,398 + 11087 mRNA_2719 0.20 -1.0
74,536 - 11087 mRNA_2719 0.28 1.4
74,538 + 11087 mRNA_2719 0.28 0.0
74,562 + 11087 mRNA_2719 0.29 2.3
74,643 + 11087 mRNA_2719 0.34 0.1