Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2690

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2690: 11058 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 13747 to 14595 11058 mRNA_2691: 11059 - Hypothetical Protein, at 15560 to 16423 11059

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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12,895 + -1.1
13,053 - 1.1
13,057 - -0.8
13,068 + 0.5
13,229 + 2.1
13,313 + 0.7
13,470 - -1.0
13,480 - 0.3
13,480 - 0.7
13,497 - 1.1
13,499 - 1.2
13,503 - -0.2
13,509 - -0.4
13,510 + -2.0
13,517 + -0.1
13,522 + 0.2
13,522 + 0.8
13,661 - 0.7
13,810 - -0.3
13,834 + 11058 mRNA_2690 0.10 -1.0
13,943 - 11058 mRNA_2690 0.23 -0.7
13,949 + 11058 mRNA_2690 0.24 0.4
13,952 + 11058 mRNA_2690 0.24 -0.1
13,958 + 11058 mRNA_2690 0.25 -0.8
13,960 - 11058 mRNA_2690 0.25 -0.8
13,963 + 11058 mRNA_2690 0.25 0.4
13,967 + 11058 mRNA_2690 0.26 1.1
13,971 - 11058 mRNA_2690 0.26 0.1
13,984 - 11058 mRNA_2690 0.28 2.0
13,994 + 11058 mRNA_2690 0.29 0.9
14,085 - 11058 mRNA_2690 0.40 0.8
14,089 + 11058 mRNA_2690 0.40 0.4
14,095 - 11058 mRNA_2690 0.41 -2.1
14,111 - 11058 mRNA_2690 0.43 0.4
14,133 + 11058 mRNA_2690 0.45 -0.5
14,168 + 11058 mRNA_2690 0.50 -0.3
14,168 + 11058 mRNA_2690 0.50 -0.1
14,168 - 11058 mRNA_2690 0.50 0.3
14,246 - 11058 mRNA_2690 0.59 -0.1
14,250 + 11058 mRNA_2690 0.59 0.5
14,267 + 11058 mRNA_2690 0.61 0.4
14,268 - 11058 mRNA_2690 0.61 -1.7
14,283 - 11058 mRNA_2690 0.63 1.5
14,283 + 11058 mRNA_2690 0.63 -0.9
14,283 + 11058 mRNA_2690 0.63 -0.5
14,285 - 11058 mRNA_2690 0.63 0.1
14,287 - 11058 mRNA_2690 0.64 -0.2
14,291 + 11058 mRNA_2690 0.64 0.6
14,318 - 11058 mRNA_2690 0.67 -0.4
14,323 - 11058 mRNA_2690 0.68 0.6
14,329 - 11058 mRNA_2690 0.69 -0.0
14,331 - 11058 mRNA_2690 0.69 -0.2
14,338 - 11058 mRNA_2690 0.70 0.6
14,342 - 11058 mRNA_2690 0.70 2.2
14,346 - 11058 mRNA_2690 0.71 0.4
14,353 + 11058 mRNA_2690 0.71 -0.2
14,355 - 11058 mRNA_2690 0.72 -1.2
14,356 - 11058 mRNA_2690 0.72 0.0
14,357 + 11058 mRNA_2690 0.72 0.5
14,360 - 11058 mRNA_2690 0.72 0.5
14,361 - 11058 mRNA_2690 0.72 0.4
14,366 + 11058 mRNA_2690 0.73 1.6
14,368 - 11058 mRNA_2690 0.73 0.4
14,368 + 11058 mRNA_2690 0.73 0.0
14,374 - 11058 mRNA_2690 0.74 -0.7
14,376 - 11058 mRNA_2690 0.74 0.8
14,380 + 11058 mRNA_2690 0.75 1.1
14,382 - 11058 mRNA_2690 0.75 -0.1
14,398 - 11058 mRNA_2690 0.77 0.9
14,401 - 11058 mRNA_2690 0.77 0.3
14,401 - 11058 mRNA_2690 0.77 0.3
14,403 - 11058 mRNA_2690 0.77 0.3
14,408 - 11058 mRNA_2690 0.78 0.7
14,409 - 11058 mRNA_2690 0.78 0.2
14,411 + 11058 mRNA_2690 0.78 -0.5
14,411 - 11058 mRNA_2690 0.78 0.2
14,413 + 11058 mRNA_2690 0.78 0.8
14,416 - 11058 mRNA_2690 0.79 2.3
14,416 + 11058 mRNA_2690 0.79 0.2
14,421 + 11058 mRNA_2690 0.79 -2.1
14,425 - 11058 mRNA_2690 0.80 0.6
14,427 + 11058 mRNA_2690 0.80 0.4
14,428 + 11058 mRNA_2690 0.80 -0.1
14,430 + 11058 mRNA_2690 0.80 0.2
14,440 - 11058 mRNA_2690 0.82 -0.3
14,456 - 11058 mRNA_2690 0.84 0.2
14,466 + 11058 mRNA_2690 0.85 0.2
14,539 - 0.7
14,545 - 1.1
14,550 + -0.1
14,551 - -0.1
14,552 + -0.6
14,552 + -0.5
14,552 + -0.5
14,561 + -0.5
14,567 - -0.7
14,567 - 0.9
14,570 + -1.0
14,571 - 0.4
14,571 - -0.3
14,572 + -0.9
14,572 + 3.7
14,573 + 1.3
14,576 + -0.4
14,576 - 0.4
14,579 + -0.1
14,582 - 1.0
14,587 + 0.3
14,588 + 0.7
14,590 - -0.4
14,592 + -0.2
14,612 - 2.5
14,628 + -1.6
14,634 + -0.9
14,636 - 0.3
14,654 + 1.7
14,656 - -2.0
14,662 + -0.5
14,662 - 0.6
14,669 + 0.9
14,675 + 1.2
14,675 + -0.1
14,676 - 0.1
14,701 - 0.5
14,718 - 0.6
14,727 - 0.5
14,729 + 1.2
14,745 + 0.8
14,763 - 1.1
14,770 + 0.1
14,787 + 1.8
14,800 - 0.3
14,805 + 0.2
14,828 + -0.3
14,828 + 0.6
14,832 - 0.9
14,833 - -0.5
14,850 - 0.9
14,922 - 2.0
14,929 + 0.9
14,932 + 0.5
14,954 - 0.7
14,958 - -0.7
14,959 + 0.2
14,968 + 2.7
14,972 + -0.0
14,975 + 0.1
14,976 + -0.1
14,982 - 0.6
14,983 - 0.6
14,983 + 0.3
14,986 - -0.7
14,992 + -0.0
14,999 + 0.9
15,002 - 0.9
15,015 - 0.2
15,043 + 0.1
15,048 - 1.6
15,048 - 0.9
15,048 - -0.6
15,049 - 1.8
15,053 - 0.5
15,054 + -0.0
15,054 - 0.6
15,056 - 0.9
15,066 + -0.5
15,071 + -0.9
15,073 + 0.6
15,077 - -0.0
15,097 - -0.4
15,104 + 0.3
15,161 + -0.4
15,162 - -0.1
15,174 - -0.2
15,197 + -0.2
15,206 - -0.5
15,208 - -0.3
15,211 - 0.4
15,230 + -1.2
15,241 + 0.6
15,247 - 0.3
15,248 - 1.1
15,254 + 0.5
15,255 + 1.0
15,255 + 0.5
15,258 - 0.4
15,260 + 0.7
15,266 - 0.5
15,269 + 2.7
15,272 + 0.1
15,276 - -0.1
15,280 - 0.1
15,286 - 0.4
15,288 - 0.0
15,320 - -0.3
15,333 - 0.3
15,335 - 0.5
15,367 - 1.9
15,381 + 1.4
15,385 - -0.1
15,405 - -0.3
15,413 + 0.2
15,426 + 0.0
15,444 + -0.5
15,476 + -0.5
15,520 - -0.6
15,520 - 0.7
15,552 - 0.1
15,555 + 0.4
15,557 + 0.4
15,561 + -0.8
15,562 - 3.4
15,563 - -1.1
15,570 + 0.5
15,576 - 0.3
15,576 - 0.8
15,579 - 2.5