Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2671

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2670: 11038 - SUPERFAMILY--SSF52058, at 724183 to 725340 11038 mRNA_2671: 11039 - K00111 glpA, glpD glycerol-3-phosphate dehydrogenase, at 726293 to 729723 11039 mRNA_2672: 11040 - K20032 ZDHHC13_17, HIP14 palmitoyltransferase ZDHHC13/17, at 730581 to 733538 11040

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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725,372 + -0.4
725,398 + -0.1
725,400 + -1.0
725,457 - -0.5
725,590 + 0.4
725,602 + 0.5
725,745 - 0.4
725,753 + -0.5
725,765 - 2.5
725,773 + 2.0
725,774 - 0.6
725,783 + 1.2
725,800 + -0.2
725,807 + 0.7
725,814 - -1.6
725,843 - -0.1
725,879 + 0.9
725,879 + 0.5
726,006 + -0.3
726,029 + -2.2
726,045 + 0.7
726,203 + 1.3
726,748 - 11039 mRNA_2671 0.13 1.3
727,041 + 11039 mRNA_2671 0.22 1.6
727,099 + 11039 mRNA_2671 0.23 1.0
727,186 - 11039 mRNA_2671 0.26 -0.2
727,484 + 11039 mRNA_2671 0.35 -1.5
727,816 - 11039 mRNA_2671 0.44 -0.0
727,933 + 11039 mRNA_2671 0.48 0.8
728,039 - 11039 mRNA_2671 0.51 -0.2
728,053 - 11039 mRNA_2671 0.51 -0.9
728,078 + 11039 mRNA_2671 0.52 0.3
728,416 + 11039 mRNA_2671 0.62 -0.7
728,511 - 11039 mRNA_2671 0.65 0.5
728,802 - 11039 mRNA_2671 0.73 -0.3
729,527 + -0.2
729,665 + 0.4
729,703 + -0.7
729,785 - 0.2
729,799 + 0.6
729,956 - 0.2
729,959 - -2.0
729,968 - -2.1
729,969 + 1.9
729,970 + -1.1
729,999 - 3.3
730,001 - -0.4
730,013 + 0.2
730,013 + 1.7
730,087 - 1.3
730,112 - 1.3
730,119 + -2.3
730,122 - 1.8
730,144 - 0.3
730,146 - 0.0
730,146 - -1.0
730,147 + 0.3
730,152 - -0.5
730,152 + -0.3
730,167 + -0.5
730,172 - 2.2
730,185 + -0.0
730,213 + 0.5
730,213 + -1.3
730,287 + 0.6
730,300 + -0.2
730,309 + 1.2
730,323 + 0.7
730,330 - 0.9
730,340 + 1.5
730,470 - 1.0
730,472 - 1.2
730,473 - 0.4
730,476 - 0.5
730,484 - -0.8
730,497 + 2.2
730,504 + -4.1
730,505 + 0.6
730,507 - 1.7
730,618 - 0.9