Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2627

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2626: 10994 - Interpro GDP-fucose protein O-fucosyltransferase, at 621778 to 623321 10994 mRNA_2627: 10995 - K05941 E2.3.2.15 glutathione gamma-glutamylcysteinyltransferase, at 624250 to 625308 10995 mRNA_2628: 10996 - K09468 MSN2_4 zinc finger protein MSN2/4, at 625936 to 628159 10996

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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623,305 - 0.1
623,452 - 0.8
623,457 - -0.1
623,460 + 0.6
623,461 + 1.0
623,586 + 0.3
623,608 + -0.5
623,620 - 0.9
623,622 - -0.1
623,627 - 0.4
623,631 - -0.4
623,752 + 1.7
623,761 + 0.2
623,764 - 0.0
623,771 - -0.8
623,906 + 0.8
623,908 + 0.5
623,913 + 1.1
623,919 + 0.6
624,074 + 1.5
624,167 + -1.2
624,467 + 10995 mRNA_2627 0.20 -3.7
624,787 + 10995 mRNA_2627 0.51 -0.2
624,787 + 10995 mRNA_2627 0.51 1.6
624,797 + 10995 mRNA_2627 0.52 1.4
624,948 - 10995 mRNA_2627 0.66 -0.2
625,525 + -1.0
625,526 + 0.8
625,531 + -0.5
625,652 - -0.2
625,658 - -1.1
625,663 + -0.3
625,675 + 1.3
625,692 + -0.5
625,816 - -0.2
625,821 + -0.0
625,831 + 0.8
625,942 - -0.5
626,101 + 0.0