Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2558

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2557: 10925 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 437565 to 439347 10925 mRNA_2558: 10926 - KOG3183 Predicted Zn-finger protein, at 439511 to 440693 10926 mRNA_2559: 10927 - HMMPfam-Translin family-PF01997,SUPERFAMILY--SSF74784, at 441201 to 442474 10927

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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438,575 - 10925 mRNA_2557 0.57 1.2
438,662 - 10925 mRNA_2557 0.62 0.8
438,832 - 10925 mRNA_2557 0.71 -1.2
438,962 - 10925 mRNA_2557 0.78 1.4
439,070 - 10925 mRNA_2557 0.84 -0.1
439,070 - 10925 mRNA_2557 0.84 2.6
439,273 - 1.4
439,301 - 0.7
439,994 + 10926 mRNA_2558 0.41 -0.1
440,130 - 10926 mRNA_2558 0.52 1.2
440,370 - 10926 mRNA_2558 0.73 -0.2
440,370 + 10926 mRNA_2558 0.73 -0.2
440,559 + 10926 mRNA_2558 0.89 -0.4
440,684 + 1.9
440,744 + 0.3
440,848 + -0.1
440,870 + 0.8
440,872 + 0.7
440,887 - 0.8
441,018 - -0.2
441,030 - -0.5
441,152 - 1.9
441,157 - 0.2
441,168 - 0.5
441,179 + 0.4
441,305 - -0.4
441,309 + -0.6
441,317 - 0.6
441,475 - 10927 mRNA_2559 0.22 0.5
441,586 - 10927 mRNA_2559 0.30 0.1
441,587 - 10927 mRNA_2559 0.30 0.7
441,602 + 10927 mRNA_2559 0.31 0.9