Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2499

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2499: 10867 - BLAST secreted protein [Moniliophthora roreri MCA 2997], at 297402 to 298448 10867 mRNA_2500: 10868 - Hypothetical Protein, at 299018 to 301561 10868

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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296,509 - -0.8
296,512 + -1.0
296,517 + -0.1
296,526 - 1.8
296,529 - 0.0
296,539 - -1.3
296,624 - -0.7
296,639 - -0.0
296,719 - 0.9
296,781 - -1.6
296,792 - -0.1
296,794 + 1.6
296,811 + 0.5
296,816 - 0.4
296,821 - -0.1
296,824 + 0.2
296,932 + 0.5
296,945 - -0.5
296,945 - 1.2
296,948 + 0.8
296,948 - 0.5
296,949 + 2.0
296,952 - 1.4
296,953 + 1.8
296,955 - -2.3
296,957 + 0.3
296,960 + -1.2
296,967 - 3.0
296,973 - 0.4
296,980 - -0.7
296,986 + 0.8
296,993 - 0.2
296,997 + 0.0
297,001 + 0.6
297,024 + 2.2
297,054 - 0.5
297,088 - -0.3
297,097 - -0.3
297,128 + -0.7
297,139 + -0.3
297,146 - -0.5
297,154 + 0.4
297,271 - -1.7
297,281 - -1.1
297,289 - -0.1
297,290 + -0.3
297,290 + -0.6
297,299 + 0.8
297,337 - -1.9
297,418 - -1.6
297,441 + -0.8
297,464 + -0.6
297,570 + 10867 mRNA_2499 0.16 -3.4
297,579 - 10867 mRNA_2499 0.17 -1.2
297,741 + 10867 mRNA_2499 0.32 -0.5
297,751 - 10867 mRNA_2499 0.33 -0.4
298,505 + -0.5
298,633 + 0.5
298,760 + 0.1
298,761 + -1.7
298,802 + 1.1
298,802 + 0.1
298,932 + 1.5
298,942 + -0.5
298,947 + 0.3
299,263 + 3.3