Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2474

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2473: 10841 - K01610 E4.1.1.49, pckA phosphoenolpyruvate carboxykinase (ATP), at 230136 to 233558 10841 mRNA_2474: 10842 - KOG0603 Ribosomal protein S6 kinase, at 234258 to 235956 10842 mRNA_2475: 10843 - BLAST CAMK protein kinase [Microbotryum lychnidis-dioicae p..., at 236278 to 238719 10843

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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233,258 + -0.3
233,258 - 0.3
233,258 + 0.3
233,260 + -0.5
233,303 - 0.0
233,304 + 0.0
233,304 + -0.6
233,309 + 2.2
233,309 + 0.1
233,312 + 1.4
233,318 - -0.0
233,324 - 2.1
233,325 - -0.7
233,327 + 1.2
233,330 - -0.1
233,331 - 0.2
233,331 - 0.2
233,334 + 0.1
233,338 - -0.0
233,340 + 0.3
233,346 - -0.4
233,347 + 0.1
233,349 + 0.2
233,353 + -0.0
233,356 + -0.1
233,356 - 0.5
233,359 - 0.6
233,360 - -0.2
233,361 - -0.6
233,370 - -0.8
233,374 + 0.2
233,385 + 2.4
233,386 - 1.0
233,485 - 0.4
233,502 - -0.8
233,508 + -0.3
233,513 + -1.3
233,514 - 0.0
233,639 + -0.5
233,830 + -0.7
233,860 - 1.1
233,926 + -0.1
233,950 - 0.2
233,966 + 0.6
234,238 + -0.4
234,907 - 10842 mRNA_2474 0.38 0.3
234,952 - 10842 mRNA_2474 0.41 0.3
235,024 - 10842 mRNA_2474 0.45 0.2
235,152 - 10842 mRNA_2474 0.53 0.3
235,234 - 10842 mRNA_2474 0.57 -0.6
235,296 - 10842 mRNA_2474 0.61 1.0
235,303 - 10842 mRNA_2474 0.62 -1.6
235,346 + 10842 mRNA_2474 0.64 -0.6
235,725 - 10842 mRNA_2474 0.86 -2.2
235,738 - 10842 mRNA_2474 0.87 -1.3
236,183 - -0.9
236,291 + -0.3
236,410 - 1.0
236,472 - 0.7
236,473 + 0.1
236,488 + -0.1
236,843 - 10843 mRNA_2475 0.23 0.7