Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2282

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2281: 10649 - K12190 VPS36, EAP45 ESCRT-II complex subunit VPS36, at 519083 to 521393 10649 mRNA_2282: 10650 - HMMPfam-Conidiation protein 6-PF10346, at 522236 to 522967 10650

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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521,269 + 0.4
521,291 + 0.8
521,326 + -0.1
521,403 - -1.2
521,410 + -0.9
521,561 - -0.2
521,564 - 0.1
521,567 - -1.1
521,568 + 1.8
521,568 + -0.1
521,569 - 0.1
521,569 + -1.7
521,603 - -0.1
521,621 - -2.2
521,627 - 0.1
521,643 + -0.2
521,655 - -0.7
521,657 + -1.1
521,701 + 0.7
521,703 - -0.2
521,713 + -0.2
521,720 - 0.2
521,865 + -0.0
521,914 + 0.8
522,015 + 1.8
522,045 + 0.4
522,494 + 10650 mRNA_2282 0.35 1.9
522,808 - 10650 mRNA_2282 0.78 0.2
522,956 - 1.4
523,083 + -0.8
523,242 + 0.4
523,287 - 0.5
523,370 + 0.9
523,659 - 0.7
523,959 - -1.2