Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2143

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2142: 10510 - Hypothetical Protein, at 179044 to 180564 10510 mRNA_2143: 10511 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 180912 to 181824 10511 mRNA_2144: 10512 - Hypothetical Protein, at 182114 to 183256 10512

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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180,045 - 10510 mRNA_2142 0.66 1.5
180,054 + 10510 mRNA_2142 0.66 0.4
180,093 + 10510 mRNA_2142 0.69 -0.5
180,201 - 10510 mRNA_2142 0.76 -0.1
180,327 - 10510 mRNA_2142 0.84 -0.5
180,932 + -0.6
180,977 - 0.1
180,981 - 0.1
181,178 - 10511 mRNA_2143 0.29 -0.2
181,179 - 10511 mRNA_2143 0.29 0.2
181,185 + 10511 mRNA_2143 0.30 1.6
181,197 - 10511 mRNA_2143 0.31 0.7
181,215 - 10511 mRNA_2143 0.33 0.3
181,254 - 10511 mRNA_2143 0.37 -0.2
181,309 + 10511 mRNA_2143 0.43 0.8
181,315 + 10511 mRNA_2143 0.44 -0.2
181,323 + 10511 mRNA_2143 0.45 -1.1
181,332 - 10511 mRNA_2143 0.46 0.1
181,394 - 10511 mRNA_2143 0.53 0.1
181,587 - 10511 mRNA_2143 0.74 1.8
181,617 + 10511 mRNA_2143 0.77 1.5
181,696 + 10511 mRNA_2143 0.86 -0.5
182,048 - -0.5
182,070 - -0.4
182,077 + 0.2
182,090 - -1.4
182,129 - 0.7
182,285 - 10512 mRNA_2144 0.15 0.0
182,316 + 10512 mRNA_2144 0.18 -2.9
182,396 - 10512 mRNA_2144 0.25 -0.3
182,405 - 10512 mRNA_2144 0.25 1.0
182,500 - 10512 mRNA_2144 0.34 -0.3
182,665 + 10512 mRNA_2144 0.48 -1.1
182,665 + 10512 mRNA_2144 0.48 0.4
182,665 + 10512 mRNA_2144 0.48 0.7
182,710 + 10512 mRNA_2144 0.52 3.4