Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2114

Experiments: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2114: 10482 - K10768 ALKBH6 alkylated DNA repair protein alkB homolog 6, at 105978 to 107393 10482 mRNA_2115: 10483 - BLAST integral membrane protein [Stemphylium lycopersici], at 107556 to 109708 10483

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
105,581 - 0.6
105,818 + 0.8
105,833 + -0.4
105,859 - -0.1
105,989 + 0.4
106,171 - 10482 mRNA_2114 0.14 1.8
106,224 - 10482 mRNA_2114 0.17 0.2
106,233 + 10482 mRNA_2114 0.18 -1.4
106,244 + 10482 mRNA_2114 0.19 0.5
106,437 - 10482 mRNA_2114 0.32 -0.8
106,645 + 10482 mRNA_2114 0.47 0.9
106,656 - 10482 mRNA_2114 0.48 0.3
106,725 + 10482 mRNA_2114 0.53 -0.5
106,810 + 10482 mRNA_2114 0.59 2.1
106,969 + 10482 mRNA_2114 0.70 1.4
106,972 + 10482 mRNA_2114 0.70 1.2
107,095 - 10482 mRNA_2114 0.79 0.6
107,103 - 10482 mRNA_2114 0.79 -0.0
107,117 + 10482 mRNA_2114 0.80 -0.0
107,304 + -0.1
107,421 - -0.1
107,423 + 0.9
107,423 + 0.9
107,436 + 0.1
107,438 - 0.2
107,444 + 0.5
107,490 - 0.9
107,562 - -0.2
107,577 - 0.1
107,580 - -0.2
107,591 - -0.3
107,627 + 2.0
107,992 - 10483 mRNA_2115 0.20 -0.2
108,029 + 10483 mRNA_2115 0.22 -0.1
108,040 + 10483 mRNA_2115 0.22 0.1
108,082 + 10483 mRNA_2115 0.24 0.1
108,157 - 10483 mRNA_2115 0.28 -0.5
108,176 - 10483 mRNA_2115 0.29 0.4
108,208 - 10483 mRNA_2115 0.30 1.3
108,314 + 10483 mRNA_2115 0.35 1.1