Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2082

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2081: 10449 - BLAST 163.m06341p [Cryptococcus neoformans], at 25578 to 27560 10449 mRNA_2082: 10450 - Hypothetical Protein, at 27894 to 29242 10450

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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27,021 + 10449 mRNA_2081 0.73 0.5
27,045 + 10449 mRNA_2081 0.74 2.2
27,196 - 10449 mRNA_2081 0.82 1.4
27,445 - 1.5
27,469 - 1.0
27,480 + 0.4
27,512 + 0.5
27,564 + 0.0
27,623 - 0.6
27,624 - -0.1
27,741 + -1.0
27,745 - 1.6
27,752 - -0.7
27,791 + 0.4
27,813 - 0.5
27,818 + 0.6
27,828 + -0.0
27,910 - 1.3
27,987 - 1.9
28,096 + 10450 mRNA_2082 0.15 0.4
28,099 - 10450 mRNA_2082 0.15 0.1
28,258 + 10450 mRNA_2082 0.27 -0.7
28,415 - 10450 mRNA_2082 0.39 -1.0
28,553 - 10450 mRNA_2082 0.49 0.1
28,789 - 10450 mRNA_2082 0.66 -0.5
28,953 - 10450 mRNA_2082 0.79 -0.9
29,113 - 1.5
29,256 + 0.0
29,512 + 1.5
29,516 - -0.2
29,525 - 0.3
29,526 + 1.5
29,530 + 0.4
29,532 - 0.1
29,535 - 1.0
29,551 - 0.9
29,700 - 1.5
29,708 + 1.8
29,710 + -0.4
29,711 + -0.0
29,738 + -1.3
29,818 - 0.3
29,851 + 1.4
29,867 + -0.1
29,886 - -0.3