Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2039

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2038: 10406 - Hypothetical Protein, at 807338 to 808315 10406 mRNA_2039: 10407 - KOG2895 Uncharacterized conserved protein, at 808552 to 810897 10407 mRNA_2040: 10408 - K11729 ACAD10 acyl-CoA dehydrogenase family member 10, at 811231 to 813728 10408

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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807,559 - 10406 mRNA_2038 0.23 -0.1
807,687 + 10406 mRNA_2038 0.36 0.3
808,295 + 1.1
808,329 + 0.8
808,335 - -0.3
808,900 + 10407 mRNA_2039 0.15 -0.1
809,927 + 10407 mRNA_2039 0.59 1.4
810,455 - 10407 mRNA_2039 0.81 0.5
810,465 + 10407 mRNA_2039 0.82 0.3
810,509 - 10407 mRNA_2039 0.83 -0.7
810,735 - -0.4
810,817 + 0.2
811,068 + 0.1
811,081 + 0.1
811,081 + 0.0
811,084 - -1.4
811,116 - 2.1
811,117 - 0.4
811,138 - 0.4
811,140 + -2.2
811,140 - 2.2
811,225 - 0.7
811,247 + -0.7
811,269 + 0.6
811,547 - 10408 mRNA_2040 0.13 0.4
811,549 + 10408 mRNA_2040 0.13 0.3
811,553 + 10408 mRNA_2040 0.13 0.7
811,842 - 10408 mRNA_2040 0.24 -0.3
811,845 + 10408 mRNA_2040 0.25 0.4