Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2033

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2032: 10400 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 794820 to 796212 10400 mRNA_2033: 10401 - K09595 HM13 minor histocompatibility antigen H13, at 796887 to 798543 10401 mRNA_2034: 10402 - HMMPfam-Spherulation-specific family 4-PF12138, at 799369 to 800999 10402

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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795,918 + 10400 mRNA_2032 0.79 1.4
796,025 + 10400 mRNA_2032 0.87 0.2
796,091 - 1.5
796,206 - 0.6
796,370 - 1.5
796,529 + 0.7
796,670 + 0.5
796,694 - -0.8
797,120 + 10401 mRNA_2033 0.14 -0.3
797,249 + 10401 mRNA_2033 0.22 -0.4
797,481 - 10401 mRNA_2033 0.36 -0.1
797,528 - 10401 mRNA_2033 0.39 1.1
797,632 + 10401 mRNA_2033 0.45 1.3
798,125 + 10401 mRNA_2033 0.75 -1.4
798,432 + -1.1
798,557 + 0.6
798,558 - -0.9
798,570 - -0.5
798,581 - -0.7
798,683 - 0.7
798,723 + 0.8
798,898 + 1.2
798,929 - 1.9
799,017 + 0.3
799,042 + -1.0
799,180 - 0.6
799,195 + 1.2
799,247 + -0.0
799,274 + 0.8
799,339 + -0.1
799,461 + 1.3
799,493 + 0.6
799,522 - 0.9