Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2028

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2027: 10395 - K07208 RHEB Ras homolog enriched in brain, at 780264 to 781182 10395 mRNA_2028: 10396 - HMMPfam-TENA/THI-4/PQQC family-PF03070,SUPERFAMILY--SSF48613, at 782141 to 783596 10396

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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781,229 + 0.4
781,478 + 2.1
781,493 + 1.1
781,503 + 0.4
781,520 + 1.3
781,678 + -0.1
781,768 - -0.6
781,791 - 1.5
781,807 - 0.5
781,811 + -0.3
781,900 - 1.6
781,917 - 0.4
781,927 + 1.9
781,932 - -0.5
781,936 + 1.2
782,075 - -0.9
782,082 + -0.8
782,084 + 0.1
782,085 - 1.7
782,085 - 0.5
782,086 - 1.9
782,092 + 1.9
782,096 + 1.6
782,097 + 2.5
782,123 + 0.4
782,124 - 1.0
782,212 - -0.7
782,214 + 0.2
782,238 + 0.2
782,238 - -1.5
782,248 + -0.2
782,256 + -0.1
782,262 + 0.3
782,277 + 1.1
782,369 - 10396 mRNA_2028 0.16 -1.4
782,381 + 10396 mRNA_2028 0.16 0.1
782,391 + 10396 mRNA_2028 0.17 -0.1
782,395 + 10396 mRNA_2028 0.17 -0.5
782,400 - 10396 mRNA_2028 0.18 -0.5
782,437 + 10396 mRNA_2028 0.20 -0.6
782,439 + 10396 mRNA_2028 0.20 0.2
782,571 - 10396 mRNA_2028 0.30 0.5
782,694 - 10396 mRNA_2028 0.38 -0.2
782,803 - 10396 mRNA_2028 0.45 1.2
783,399 - 10396 mRNA_2028 0.86 -0.2
783,439 + 10396 mRNA_2028 0.89 0.3
783,695 + 0.4
783,833 - -0.7
783,854 + 0.4
783,858 - 0.1
783,914 + 0.6
784,091 + -0.0
784,114 - 1.0
784,147 - 0.4
784,181 - -1.2
784,187 + -0.5
784,201 + 1.3
784,309 - 2.5
784,318 - -0.3
784,335 + 1.5
784,339 + -0.3
784,493 - 1.5
784,508 - 0.9
784,526 + -0.1
784,546 - -0.4
784,574 + 0.1