Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1998

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1997: 10365 - KOG0627 Heat shock transcription factor, at 702510 to 703691 10365 mRNA_1998: 10366 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 704179 to 706336 10366 mRNA_1999: 10367 - Hypothetical Protein, at 706788 to 707404 10367

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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703,819 + -0.3
703,907 - -0.1
703,919 - 2.6
704,071 - -0.4
704,098 - -0.4
704,101 + -0.0
704,114 + 0.5
704,249 - 0.3
704,254 + 0.2
704,296 - 0.6
704,544 - 10366 mRNA_1998 0.17 0.3
704,554 + 10366 mRNA_1998 0.17 -0.5
704,565 - 10366 mRNA_1998 0.18 -0.5
704,672 - 10366 mRNA_1998 0.23 -0.1
705,128 + 10366 mRNA_1998 0.44 -0.1
705,327 + 10366 mRNA_1998 0.53 -1.2
705,583 - 10366 mRNA_1998 0.65 -0.1
705,708 + 10366 mRNA_1998 0.71 0.6
705,920 - 10366 mRNA_1998 0.81 2.1
706,128 - 0.5
706,447 + 0.3
706,849 + 1.0
706,897 + 10367 mRNA_1999 0.18 -2.1
706,914 + 10367 mRNA_1999 0.20 1.7
706,916 + 10367 mRNA_1999 0.21 -0.3
707,071 + 10367 mRNA_1999 0.46 1.5