Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1900

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1899: 10267 - K14946 RBFOX, FOX RNA binding protein fox-1, at 462869 to 464416 10267 mRNA_1900: 10268 - K15071 RCY1, POF6 recyclin-1, at 464695 to 468117 10268 mRNA_1901: 10269 - HMMPfam-Spo7-like protein-PF03907, at 468442 to 470059 10269

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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463,748 - 10267 mRNA_1899 0.57 1.7
463,748 - 10267 mRNA_1899 0.57 0.2
464,132 - 10267 mRNA_1899 0.82 1.8
464,274 - 0.5
464,583 + 1.3
464,940 - 1.3
464,984 - 1.1
465,036 + 0.1
465,347 + 10268 mRNA_1900 0.19 2.0
465,455 - 10268 mRNA_1900 0.22 1.8
465,753 + 10268 mRNA_1900 0.31 1.3
466,444 + 10268 mRNA_1900 0.51 1.1
467,341 - 10268 mRNA_1900 0.77 1.6
467,464 + 10268 mRNA_1900 0.81 -1.3
467,570 + 10268 mRNA_1900 0.84 0.9
467,590 + 10268 mRNA_1900 0.85 0.1
467,733 - 10268 mRNA_1900 0.89 -0.8
468,105 - -0.0
468,209 + 0.5
468,247 - 0.4
468,373 - 0.6
468,375 + 0.2
468,382 + 1.2
468,383 - 0.5