Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1814

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1813: 10181 - K04352 RASA1, RASGAP Ras GTPase-activating protein 1, at 269173 to 274604 10181 mRNA_1814: 10182 - K00858 ppnK, NADK NAD+ kinase, at 275166 to 278698 10182

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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274,633 - 2.0
274,909 + 2.1
275,050 + -0.3
275,172 - 0.9
275,184 + 0.3
275,190 + -0.6
275,190 + 0.3
275,191 + -0.6
275,199 - 0.6
275,199 + -1.1
275,200 - -0.5
275,203 + 2.7
275,207 + 0.5
275,340 - -0.5
275,342 - 1.2
275,350 + -0.5
275,353 - 0.3
275,374 - 0.4
275,512 - 3.0
275,515 - -0.4
275,520 + 10182 mRNA_1814 0.10 2.1
275,690 - 10182 mRNA_1814 0.15 0.2
275,798 - 10182 mRNA_1814 0.18 0.1
275,802 + 10182 mRNA_1814 0.18 -0.1
275,848 + 10182 mRNA_1814 0.19 -0.6
276,553 + 10182 mRNA_1814 0.39 -1.6
276,806 - 10182 mRNA_1814 0.46 -0.6
276,821 - 10182 mRNA_1814 0.47 0.3
276,821 + 10182 mRNA_1814 0.47 -0.8
277,426 - 10182 mRNA_1814 0.64 -0.2
277,558 - 10182 mRNA_1814 0.68 0.9
278,177 - 10182 mRNA_1814 0.85 -1.0
278,437 + -0.9
278,571 - 0.1
278,586 - 0.7
278,603 + 0.6
278,859 - -0.1
278,871 - 0.8
279,025 - 2.1
279,153 - 0.4
279,154 - -0.5
279,168 + 1.3
279,183 - 1.2
279,395 - -2.1